Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2693 ATGAATTTGCAGAGCGGGCTTCCCCTGCTTTTGCATCAATACACGGCGCTTTTGAAGAAGAACTTCTTGCTCTCATGGCGGAACAGGAAAGCTACCTTCCTCCAGATTCTCTCTCCTCTCTTCTTCTTGTTCCTTATATTCGCCATTGATAAGGCCATTCAGGCTCGCTTCTCCTCGTCTAAGGCTAACAAGAGAATCACCAATCCCGACACGTTGGTCTCTCCCCCCATTATTCCCTGTGAGGAAAAGTTCTTTGTTAAACTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGGGAATGCCAAATTTCAGACTATTGTCAATCGTATCATGGCTAACAATCCTGGCCGGCCCATACCTTCTTCTAAGGTTCTATCGTTTAGCAATGCAGCTGAAGTGGATGACTGGCTTTTCAAGAATCCTATGCATTGTCCAGGTGCTCTACATTTCACCGAAAAAAATGCGACTGTCATTAGCTATGGTGTGCAGACAAATTCAACCTTCATACAAAAGCGAGGGCGCCATGAAGACCCCACTTTCGCATTTCAGCTCCCACTTCAGCTTGCTGCGGAGCGTGAGATTGCTAGATTTCTGATTGGAGATCCATCCTTCAACTGGAACTTTTCTCTCAAAGAATTTGCACACCCTGCCATAGAATTTTTCTCTACAGTGGCTTCAATAGGTCCAGCATTTTTCCTGGCAATCGCCATGTTTAACTTTGTTCTTCAGATGGGTTCTTTGGTGACAGAAAAAGAAAATAAACTTCGTCAGGCAATGAAGATGATGGGCCTCTACGACTCTGCATACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACACTCATCTCATCACTTCTCATAGTTCTTTTCGGAATGATGTTTCAATTTGATGTTTTTCTGAACAACAATTTCGCAGTTGTGTTTCTTCTGTTCTTTCTTTTTGAACTCAGCATGACGGGATTTGCCTTCATGTTGTCTGCTTTCATCCGTAAATCATCTTCAGCCACAACAGTGGGGTTCTCTATATTTATTATCGGCTTTTTGACTCAGATCGTTGTACAAGCAGGATATCCATATGAGAATGACACCTCCGGGGCTTTCCGAATTGTCTTTTCAATTTTCCCACCCAATCCATTTGCTCAAGGTCTATATGTGCTTTCACAAGCAACTTCCACTCCTGATGATGAGGGTGTTAAATGGAGTAAACGGGGAGAATGTGCTCCAAATGATGATGATTGTCACATAACAATTAATGATATCTATCTGTGGCTGTTGGGTACATTCTTTGTGTGGCTTATTCTGGCTATATACTTCGATAACATAATCCCAAATGCGTCTGGTGTGAGGAAATCAGTCTTCTACTTCCTAAATCCCAGATATTGGATTGGAAAAGGAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGTTGTGTAGGTTCAGTCCCACCACAAGAGCACATCACACCGGACGATGAAGATGTCCTTGAAGAGGAAAACATTGTAAAGCAGCAAGCAGCAGAAGGTATTGTAGACACAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACGTATCCCGGTGCATTGAACATTGGTTGCTGCTGCAAATGCAAAAGAACTACTGCTTTCAATGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTCTGTCTTCTAGGACCCAATGGAGCTGGGAAAACTACTGCTATTAATTGTTTGACTGGGATAACTCCAGTTACTCATGGAGATGCATTGATATATGGACATTCCATAAGAAGCTCCACTGGCATGTCAAACATTCAAAAGCTTATAGGCGTCTGTCCCCAGTTTGATATCTTATGGGATGCATTGTCTGGTGAAGAACACCTCCATGTCTTTGCAACCATTAAAGGGCTTCCCCCTTCTTCCGTCAAATCAATTGCTCAGAAATCATTAGCAGAAGTGAGACTCACAGAGTCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGGGGAATGAAACGGCGTCTTAGTGTTGCCATCTCCCTTATTGGGGATCCTAAGCTAGTCATTATGGATGAACCGACAACTGGTATGGATCCAATAACAAGGAGGCATGTATGGGACATAATAGAAAATGCAAAACGGGGGCGAGCTATTGTCCTCACAACACACTCTATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAATCCGGTTGAAGTCACGATTTGGTACTGGTTTTACAGCTAATATCAGCTTCCATGGAAACAATTTTGAACGAAGTACTGCTGATACAGAAGAAACTTCTGCAAGAAATCATGAGATAGTAAAACAATTCTTTGAGAATAATTTAGGTGTGGTACCAAAAGAAGAGAACAGTGCCTTCTTAACTTATGTGATTCCTCATGATAGAGAGGGAGTATTGATGAACTTTTTTGAGGAACTCCAAGATAGAGAAGAAGAATTTGGCATATCTGACATCCAACTGGGTCTTGCAACTCTGGAAGAGGTTTTCTTGAATATTGCAAGACAGGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGAGCTTGACAACTCTAACGTTGACTTCTGGTGAATCAGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCAGAAACTGAATCAGCTGAAAACCCCAGAGGGATAATGGTAGAAGTATATTGGGAGCAAGATGATACTGGTGCCCTCTGCATTGCTGGACACTCACGCCAAGTTCCTGTACCTCCCACTGTTCAACTATCTGTTCCTCCGGCCTTAACAAGACGTCTAGGTCTCAGGCGGCGGTCAGAACCAGTTGAGGGGATTGTGATTGACCCCAGTCAAGTTAGTACTGTCAATTTCCAGTGA 2904 0.4349 MNLQSGLPLLLHQYTALLKKNFLLSWRNRKATFLQILSPLFFLFLIFAIDKAIQARFSSSKANKRITNPDTLVSPPIIPCEEKFFVKLPCYDFVWSGNGNAKFQTIVNRIMANNPGRPIPSSKVLSFSNAAEVDDWLFKNPMHCPGALHFTEKNATVISYGVQTNSTFIQKRGRHEDPTFAFQLPLQLAAEREIARFLIGDPSFNWNFSLKEFAHPAIEFFSTVASIGPAFFLAIAMFNFVLQMGSLVTEKENKLRQAMKMMGLYDSAYWLSWLTWEAVITLISSLLIVLFGMMFQFDVFLNNNFAVVFLLFFLFELSMTGFAFMLSAFIRKSSSATTVGFSIFIIGFLTQIVVQAGYPYENDTSGAFRIVFSIFPPNPFAQGLYVLSQATSTPDDEGVKWSKRGECAPNDDDCHITINDIYLWLLGTFFVWLILAIYFDNIIPNASGVRKSVFYFLNPRYWIGKGGDKVREGGVCSCVGSVPPQEHITPDDEDVLEEENIVKQQAAEGIVDTNVAVQIRGLAKTYPGALNIGCCCKCKRTTAFNAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTHGDALIYGHSIRSSTGMSNIQKLIGVCPQFDILWDALSGEEHLHVFATIKGLPPSSVKSIAQKSLAEVRLTESAKVRAGSYSGGMKRRLSVAISLIGDPKLVIMDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFTANISFHGNNFERSTADTEETSARNHEIVKQFFENNLGVVPKEENSAFLTYVIPHDREGVLMNFFEELQDREEEFGISDIQLGLATLEEVFLNIARQAELESAAAEGSLTTLTLTSGESVKIPVGARFVGIPETESAENPRGIMVEVYWEQDDTGALCIAGHSRQVPVPPTVQLSVPPALTRRLGLRRRSEPVEGIVIDPSQVSTVNFQ 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2693 967 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524|GO:0016887
Acco04g2693 967 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 517 763 IPR003439 GO:0005524
Acco04g2693 967 CDD ABC_subfamily_A 517 751 - -
Acco04g2693 967 Gene3D - 505 794 IPR027417 -
Acco04g2693 967 SMART AAA_5 556 740 IPR003593 GO:0016887
Acco04g2693 967 Pfam ABC transporter 550 692 IPR003439 GO:0005524
Acco04g2693 967 Pfam ABC-2 family transporter protein 31 438 IPR013525 GO:0016020|GO:0140359
Acco04g2693 967 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 492 859 IPR026082 GO:0016020|GO:0055085|GO:0140359
Acco04g2693 967 FunFam ABC transporter A family member 2 507 771 - -
Acco04g2693 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 745 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2693 Acco-ChrAcco04 43717830 43723913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2693 558 782 Calmodulin-binding Proteins AT2G36910 21.186 1.34e-08 57.4