Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2673 ATGGATTACTATAACATACTGAAAGTGAATCGAAATGCGAGTGAGGACGATTTGAAGAAGGCCTACAAGAGGCTAGCGATGATTTGGCACCCAGACAAAAACCTTGTTCACAAAAGGGAAGCTGAGGCCAAATTCAAGCAAATTTCCGAAGCCTTTGACGTTTTGAGTGATCCCCAAAAGCGTCAGATCTATGATCTCTACGGCGAGGAGGCCCTCAAGTCTGGTCAGTTCCCGCCACCTCCGCAATCCTCTTCTTCCATGTCCTCCTCGTCTTCTCGTGCTTACCAGCATTTCCAAAACCAACAACGCCAGCATAGCAACACGTCTTACCGGTTTAATCCTAGGGATGCCGACGACATTTACGCGGAAATTTTTGGCTCGGAGAATGGTGGTACTGGTGGTGGAGGTCGGAGGAATGGTGCGCATAGGGACGGGTTTTTTAGAACTTCAAATGGCACGTATGGTGGAGGGAGTAGGAAGGCTGCGGCGGTGGAGACTCCTTTGCCGTGTAGCTTGGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAAGATCTCAAGGAATGTCTGTGACACTTCAGGGAAGTCTTGGAATGTGGAGGAGATATTGACTATTGAGGTGAAACCTGGTTGGAAGAAAGGAACAAAGATTACTTTCCCTGAGAAGGGTAACCAGGAGCCTGGTGTCATTGCTGCAGATCTTATATTTGTGTTGGATGAGAAACCCCATGCTGTTTATAGGAGGGATGGTAATGATCTGGTGATCAACCAAGAGATTACTCTTCTAGAGTCCCTTACAGGTAAAACCCTAGACCTTACTACCTTAGATGGAAGGAATCTCATGATCCCACTAACCGATATTGTCAAACCTGGCGGTGAGGTCGTTGTCCCTAATGAGGGAATGCCCATTTCAAAAGAGCCTGGGAAGAAGGGCAATTTGAGGATTAAGTTTGAGGTGAAGTACCCTTCGAGGCTAACCCCAGAGCAGAAATCTGAGCTCATAAGAGTTTTGGGTGGGAATGGAAATACAAATGTTTGA 1038 0.4682 MDYYNILKVNRNASEDDLKKAYKRLAMIWHPDKNLVHKREAEAKFKQISEAFDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSMSSSSSRAYQHFQNQQRQHSNTSYRFNPRDADDIYAEIFGSENGGTGGGGRRNGAHRDGFFRTSNGTYGGGSRKAAAVETPLPCSLEELYKGVKKKMKISRNVCDTSGKSWNVEEILTIEVKPGWKKGTKITFPEKGNQEPGVIAADLIFVLDEKPHAVYRRDGNDLVINQEITLLESLTGKTLDLTTLDGRNLMIPLTDIVKPGGEVVVPNEGMPISKEPGKKGNLRIKFEVKYPSRLTPEQKSELIRVLGGNGNTNV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2673 345 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Acco04g2673 345 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Acco04g2673 345 Gene3D DnaJ domain 1 137 IPR036869 -
Acco04g2673 345 Pfam DnaJ C terminal domain 164 322 IPR002939 -
Acco04g2673 345 MobiDBLite consensus disorder prediction 77 113 - -
Acco04g2673 345 CDD DnaJ_C 164 325 - -
Acco04g2673 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 165 243 IPR008971 GO:0006457|GO:0051082
Acco04g2673 345 Gene3D - 243 323 - -
Acco04g2673 345 FunFam DNAJ heat shock family protein 242 337 - -
Acco04g2673 345 FunFam Dnaj homolog subfamily b member 160 241 - -
Acco04g2673 345 SUPERFAMILY Chaperone J-domain 1 88 IPR036869 -
Acco04g2673 345 SMART dnaj_3 1 60 IPR001623 -
Acco04g2673 345 FunFam DnaJ subfamily B member 13 1 135 - -
Acco04g2673 345 Gene3D - 162 241 - -
Acco04g2673 345 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Acco04g2673 345 CDD DnaJ 2 57 IPR001623 -
Acco04g2673 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Acco04g2673 345 MobiDBLite consensus disorder prediction 125 160 - -
Acco04g2673 345 PRINTS DnaJ domain signature 22 37 IPR001623 -
Acco04g2673 345 PRINTS DnaJ domain signature 60 79 IPR001623 -
Acco04g2673 345 PRINTS DnaJ domain signature 4 22 IPR001623 -
Acco04g2673 345 PRINTS DnaJ domain signature 40 60 IPR001623 -
Acco04g2673 345 MobiDBLite consensus disorder prediction 72 113 - -
Acco04g2673 345 Pfam DnaJ domain 2 65 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2673 Acco-ChrAcco04 43524856 43528739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2673 3 72 C2H2 Transcription Factor Family AT1G74250 35.135 1.75e-09 57.4