Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2663 ATGACCATGTCACAACGATCTCCTTCTCCTCCTCTTGTTTCTAACGAACCCTCTAATCGAACCTCGCCTGAACCCAATTCTCAAGGCCATATATCTGATTCTCCCAACGACGTCGTTCCCGCTTCTAAGGAGGAAACGACCGCCGCTCCCGCCACTACCAGGAGCAACCGACCATCGCGCGCCTGCACCATTCGAGCTGCTGCTCGTCTCTATTCACCAACGCAGCCGGCAGCTGGCCGGCGACTTAAAGGTTTAAAGAAGGAGCAGCGGCTGCCGGAGGGCTCGCCGGAGCAACAGCAGCAATGTAGCAGTATTTTGACACCGCTTGTGGAATCACCATCACCTTCGCAGTTGACTCGGTGGAACCTGAGGGCTATGTGGGAGTTAGCTTCTATACTCCATTTCTTGCATGTATTTAGGCCTCTTTTGAACATCTCAGCAGAATTCTCGGCGGAAGAGTTTGAGACAGCTCTCCTTACCCCCAATGACACATTGAGTGATATACATATGCCCTTACTAAAGGCAATCCCTCCCATTACACGAATGGCACTCACACGTGATACCTGGATAACCGTATTATGCAGAAAATTGAGAGACTGGTGGCACTGGGTTGCGAATGGGGAACTTCCTATTGTTGCTTCACATGGGCTAGAAATTGACGCATACAAATCACTTGATCCTGGGACTCGTGTGATAATCTTAAAGGCACTATGCGACATTCGTGTTGAGCAAGAAGATATTCGAAGTTATATTGACAGCTCAATCAAACATGGTGTTCAACTTTCATCATTTCGTAAAGAGCGTATCGGGGGTGATTCACCTGGAATTTTTTATTGGTATGAAGATGACCCCATAATTGGCCATAGGTTGTACCGGGAAGTTAGGAAAACTGAAGTCATTCAAATGAGGAAAGGGAAACCAAAAGGTTCCCGGGTCAATTCTAGTACCACATATCAGTGGGAAACAGTTGCTACTAATTTTGATGAATTTGTAGATGTCACCGATAAGCTTTTCTCAAGCAAAAACAAAACGGAGGTGTCACTAGGGAAGAAGTTGAAGGTGGACATGCTTCCTGAGATTGAGAAAGTTCACAAGAAAAAAGAGCGGTTGCTGAAGAAGCAACAAAGAGAAGCTCTTCTTCTTGACACTTTCTTGGTTGTTGACGGGATTGGTCCTGGGCGTTCACTTCGTGGTAGGAAACCTGTTACCTACACATTTGATGATTATGATCGGTCCATCAACGAGGCAATTAAGATAACAGCACAAAAACAACCATCCCCAGAGGCAGAGCCTATAAACAAGAGAGAAGTAGGAGAAAAACCTGAAGTTTTGACTAACGGTAAATTGAGTGGGCCTTCACACGCCTCTCAACGTCTGAGCTTTAGTGTACCATCGCCAAATTCACTTGACTCTGATGATACTGAAGAAGAGCTTAAATCTGAACCATTGGATCGGAGCAATCGACGAAGACAAAGACCTATGCGGTATTCAGAGAGAGAGTTTGTTCAAGCAGTTTCAGATAATGAGACAGACTTTGATAGTGATGATGATATTGTTGGAGAAGCTGTGTATGATGACGAGTATCTCAGGCAACGTAAGCAAAGAAAGGTTTCTAGTAGCTCTGAAGGAGATGAAGAATATCAATGGGATGAAGAAAATGTTGAAGAAGATGATCAGGAAGATTCGTTAAGTATCAGTGAGGAAAGTGACCAACCCCGTACATTCAAGCCATTGGCAGGCCGTACCAGGAGGGAAACTAAGCTCCGATCTGTTGGTGAGATCCAATCAGGTCTACGACGCAGTAAAAGGGTTACTAGAAACCCAATAAATTACAGACAATATGTGATGTCAGATTCAGAAACAGAATCTACAAAGCCGAAGAAGTCTAATGCTGCAGATGATCATTCAGATCCCAGTGAGAACGAGAACGGGGAATATATGATGGAAACTGAAACAGAAGATTCGGATGTTGGCAAAGATAACGAAGATCAAGAGGACGAACAGGAGATGAACCTGGATAAGCCAATTGATTTTCCTGTGGAGGAGAGAGACCAAAACCAGCCGCCTGAGAAACTAAACAGTCCCAGACAGGAGGAAGTTGAGGGCATGAACAAAAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCCCAGGTTTTGAAGATGGTCCCAACTCAATAATGAACGACGAAAACGATGATTACTGA 2208 0.4497 MTMSQRSPSPPLVSNEPSNRTSPEPNSQGHISDSPNDVVPASKEETTAAPATTRSNRPSRACTIRAAARLYSPTQPAAGRRLKGLKKEQRLPEGSPEQQQQCSSILTPLVESPSPSQLTRWNLRAMWELASILHFLHVFRPLLNISAEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVANGELPIVASHGLEIDAYKSLDPGTRVIILKALCDIRVEQEDIRSYIDSSIKHGVQLSSFRKERIGGDSPGIFYWYEDDPIIGHRLYREVRKTEVIQMRKGKPKGSRVNSSTTYQWETVATNFDEFVDVTDKLFSSKNKTEVSLGKKLKVDMLPEIEKVHKKKERLLKKQQREALLLDTFLVVDGIGPGRSLRGRKPVTYTFDDYDRSINEAIKITAQKQPSPEAEPINKREVGEKPEVLTNGKLSGPSHASQRLSFSVPSPNSLDSDDTEEELKSEPLDRSNRRRQRPMRYSEREFVQAVSDNETDFDSDDDIVGEAVYDDEYLRQRKQRKVSSSSEGDEEYQWDEENVEEDDQEDSLSISEESDQPRTFKPLAGRTRRETKLRSVGEIQSGLRRSKRVTRNPINYRQYVMSDSETESTKPKKSNAADDHSDPSENENGEYMMETETEDSDVGKDNEDQEDEQEMNLDKPIDFPVEERDQNQPPEKLNSPRQEEVEGMNKRRFLDLNELAPSPGFEDGPNSIMNDENDDY 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2663 735 MobiDBLite consensus disorder prediction 644 670 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 478 506 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 544 565 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 449 469 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 671 708 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 419 735 - -
Acco04g2663 735 Pfam DDT domain 131 176 IPR018501 -
Acco04g2663 735 Coils Coil 357 377 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 621 642 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 523 543 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 88 114 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 1 60 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 94 114 - -
Acco04g2663 735 MobiDBLite consensus disorder prediction 601 620 - -
Acco04g2663 735 PANTHER REMODELING AND SPACING FACTOR 1 53 697 IPR028938 GO:0006355|GO:0031213
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2663 Acco-ChrAcco04 43444169 43451284 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Acco04g2663 DDT 2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2663 04 43444169 43451284 Acco13g0675 13 4910579 4918029 CCT
Acco04g2663 04 43444169 43451284 Acco04g2663 04 43444169 43451284 ECH