Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2655 ATGATCTTTTCATCCCCTTTTGTTTCGGGATTCCTTTGCTATTATACTGCTATAGCCTCAAAATCAATGCCCATCCTTTTCTCACCCTCGCGTGCTTGTTCAATTCATTGGGGTATTTCCGTTTTCTTCTCCGTTCTTACGCTCTCCCCTTTCATCGCTTCGCCCAAGGCCCAAGCCACTTCCGACAGCAGCATGTCTCGATCACTCTCTGCCACCTCCACTGATGGCGACCATGCTTCTTCCCCCGCCCCCGCCGGCGAGATCATCTTGTTCGGCGTTAGAGTCGTTGTCGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTCTCGCAGTACGAGCGTCCTCAGGATGGCTCGAATAACAGCAAGGAGGATGTTCTTGCCGCCGGTTATGCCTCCGCCGACGACGCTGTTGTTCGTAATTCCAGCAAGCAACGCGAGCGCGAGCGCAAACGAGGGGTTCCATGGACGGAGGAAGAACACAGGCTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAGGGCGATTGGAGAGGGATCTCAAGGAACTATGTGAAAACAAGGACTCCTACACAGGTTGCGAGCCATGCTCAGAAGCACTTCCTTCGAAAATGCAACCTCAATCGTCGACGTCGTAGATCCAGCTTGTTTGACATGACTACTGACTCGGTTTCGGCTAATCCAGTGGAAGAACAGATCCAGCCTCAAGATACTATGCCTCATTCACTTCTTGTGCACCCTGCATCCTCTGAAACCTGCAACATCAATGGATTTTCAATGATGCCATCATATCCAATGGCTGATGGGTCTGGAGTGATTTCATTCCCAGGCAGGAATCCGGTGGAGAACCTCCCTCTTGGGCATGGAAATTATGAACGCAATGGTCGAATTCATTCTGTTCCAGATCCAAAAGCTTCTGCTATGTTTGATGTTGCCTCGAGTTCGAGCTCTTCTGTTGATCTACCAATGCTGTCTCTTGGACTATCCTTGACGCCTGATCAGAGGAAAAAAGCATCAAGGCACTCGAATTTACATGCAGTCCCATGTTACAACAATGGAGAAGGCATCATAAGTGTTGCTTGA 1080 0.4954 MIFSSPFVSGFLCYYTAIASKSMPILFSPSRACSIHWGISVFFSVLTLSPFIASPKAQATSDSSMSRSLSATSTDGDHASSPAPAGEIILFGVRVVVDSMRKSVSLNNLSQYERPQDGSNNSKEDVLAAGYASADDAVVRNSSKQRERERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKHFLRKCNLNRRRRRSSLFDMTTDSVSANPVEEQIQPQDTMPHSLLVHPASSETCNINGFSMMPSYPMADGSGVISFPGRNPVENLPLGHGNYERNGRIHSVPDPKASAMFDVASSSSSSVDLPMLSLGLSLTPDQRKKASRHSNLHAVPCYNNGEGIISVA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2655 359 CDD SANT 155 200 IPR001005 -
Acco04g2655 359 FunFam transcription factor MYB1R1 154 205 - -
Acco04g2655 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 204 IPR017930 -
Acco04g2655 359 PANTHER TRANSCRIPTION FACTOR KUA1 83 306 - -
Acco04g2655 359 ProSiteProfiles SANT domain profile. 151 204 IPR017884 -
Acco04g2655 359 Pfam Myb-like DNA-binding domain 155 199 IPR001005 -
Acco04g2655 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 151 203 IPR006447 GO:0003677
Acco04g2655 359 SUPERFAMILY Homeodomain-like 150 202 IPR009057 -
Acco04g2655 359 Gene3D - 156 205 - -
Acco04g2655 359 ProSiteProfiles Myb-like domain profile. 148 200 IPR001005 -
Acco04g2655 359 SMART sant 152 202 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2655 Acco-ChrAcco04 43378658 43381626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco04g2655 Myb_DNA-binding 2.6e-10 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2655 04 43378658 43381626 Acco13g0664 13 4857494 4859033 CCT