Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2648 ATGGAGAAAGATTTGGATGAAGTATTGCAGTCGCATATTGTTTATTCAAATGTTTCAAAAGGAGTTTTAGAAAAGTCAAAGGATTTGGTTGCCGCCTTTGGGACTGATGATAAGACAAAGATATGTTTGGAGATTTTACAGAAAGGAGAGCTTCAGGTTGTTGGGAAAGAGAGGGAATCTATTCTTTCAAATCAGTTTAGGGATATTGCAACCATTGTTATGCAAAAGACACACAATCCTGAAACTCAACGTCCTTACACAATCAATGTGATTGAAAGACGATTGATGCACGAAATACATTTTGCTGTTGACCCAAACAGCAGTTCAAAGAAACAGAAAAGGTTTTTAGGAAGAGAAAAGGTCAATTATAATTGCCAAGCCTTAGACCTGAAGTTGATGAATGGGCAACTTTCATAA 417 0.3645 MEKDLDEVLQSHIVYSNVSKGVLEKSKDLVAAFGTDDKTKICLEILQKGELQVVGKERESILSNQFRDIATIVMQKTHNPETQRPYTINVIERRLMHEIHFAVDPNSSSKKQKRFLGREKVNYNCQALDLKLMNGQLS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2648 138 Gene3D - 1 52 IPR036786 -
Acco04g2648 138 SUPERFAMILY Hypothetical protein AF0491, middle domain 47 112 IPR037188 -
Acco04g2648 138 SUPERFAMILY FYSH domain 2 52 IPR036786 -
Acco04g2648 138 Gene3D - 56 121 IPR037188 -
Acco04g2648 138 PANTHER RIBOSOME MATURATION PROTEIN SBDS 1 112 IPR039100 -
Acco04g2648 138 ProSitePatterns Uncharacterized protein family UPF0023 signature. 2 21 IPR018023 -
Acco04g2648 138 Pfam Shwachman-Bodian-Diamond syndrome (SBDS) protein 2 58 IPR019783 -
Acco04g2648 138 Pfam SBDS protein, domain II 67 112 IPR018978 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2648 Acco-ChrAcco04 43311836 43313143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2648 2 119 C2H2 Transcription Factor Family AT1G43860 77.119 2.51e-59 184