Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2642 ATGACTATCGCCGGCGACGTTTTCAGGCTCAATTTGCCTCAAGTTCTCGATGATTCGCCTTCCTTTTCTCAGGAATTCCACGTTCTCGCCGTTGATGACAGTCTTGTCGATCGCAAGGTCATCGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTGACGGCTGTGGAGAGTGGAACCAGAGCTTTACAATATTTGGGATTGGACAGAGAGGATAACTCCATTGGATTTAATAGTGCAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTTAAGAAGATCAAGCAGGAGTCATCTATGTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGTTATCAGATGTTAAACGATTGACTGATTTCATCATGAAAGGTGAAACGAAAGGAAAGGAGAAGAGATCTCACAAAAGAAGGCGATCTGATGATCAATGTTCATCTCCATCAACACTGCCCTTATCCAAGTCCCATCCATCATTGTCACCATCTTCCTTGTCCTCCAAGAGATCTAGACTACAAGCAAATTTTGATTAG 627 0.4258 MTIAGDVFRLNLPQVLDDSPSFSQEFHVLAVDDSLVDRKVIERLLKISSCKVTAVESGTRALQYLGLDREDNSIGFNSAKVNLIMTDYSMPGMTGYELLKKIKQESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMKGETKGKEKRSHKRRRSDDQCSSPSTLPLSKSHPSLSPSSLSSKRSRLQANFD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2642 208 SMART REC_2 26 151 IPR001789 GO:0000160
Acco04g2642 208 CDD REC_typeA_ARR 28 150 - -
Acco04g2642 208 Gene3D - 27 197 - -
Acco04g2642 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 185 IPR045279 GO:0009736
Acco04g2642 208 MobiDBLite consensus disorder prediction 176 208 - -
Acco04g2642 208 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Acco04g2642 208 SUPERFAMILY CheY-like 25 156 IPR011006 -
Acco04g2642 208 MobiDBLite consensus disorder prediction 158 208 - -
Acco04g2642 208 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2642 Acco-ChrAcco04 43287788 43289315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2642 5 169 Response Regulator Gene Family AT3G48100 69.048 9.91e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g2642 Response_reg 4.7e-21 CL0304