Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2638 ATGATCATGATCCACGCTAGTAATCACCATAAGATCTTACAATTATTGCTACTGAACTCTGTTGTGTTTGCATTCCGTAGAGAGAGAAGCAAAGCAAAGATGACGATCACTGTTCCAAGTCGGCAGCTTTTCCTAGATGGCGAGTGGAAAGAGCCGATCCTCAAGAAACGAATTCCTGTCATCAATCCCTCCACTGAATTCCAAATTGGAGAAATTCCAGCTGCTACCGCGGAGGATGTGGACCTTGCAGTGGCTGCTGCTCGGAGAGCCCTGGTCAAGAACAAGGGTAAAGACTGGGCAACAGCTTCTGGTTCTGTTCGTGCTCGGTATTTGCGAGCTATTGCTGCTAAGGTAATGGAAAGGAAGTCTGAACTAGCAGAACTTGAAGCAATTGATTGCGGAAAACCACTAGATGAAGCATTGTGGGACATGGATGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTTGCTGACGGATTGGATGCAAAGCAAAAGGCTCCCATAGCTCTTCCCATGCAAACCTTCAAGAGTCATGTTCTTAGGGAGCCCATTGGAGTTGTTGCATTGATTACTCCATGGAACTATCCTCTATTAATGGCTGTGTGGAAAGTTGCTCCTGCCTTGGCTGCTGGTTGTACTGCAATTTTGAAGCCATCTGAATTGGCATCTGTGACGTGTTTGGAGCTGGGTCAGATATGTAGAGATGTGGGCCTTCCTCCAGGAGTCTTAAATATTCTAACTGGATTAGGCCTTGAAGCTGGTGCTCCTTTGGCATCGCATCCTCATGTGGACAAGATTGCCTTTACTGGAAGCTCTATGACTGGGAGCAAGATTATGTCAACTGCAGCTCAACTGATCAAGCCTGTTTCACTAGAGCTTGGTGGTAAAAGCCCGATTGTTGTTTTTGGGGATGTTGACCTTGATAAAGCTGTTGAATGGACCATGTTTGGCTGTTTCTGGACAAATGGTCAGATTTGTGCTGCCACTACCCGTCTTATTATACATGAAAGCATAGCTGAACAATTTTTTGATAGGCTTGTGAAATGGATTAAAAACATCAAGATATCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGTCCAGTTGTTAGTAAGGGACAGTACGAGAAAGTATTGAAGTTCATCTCAACTGCTAAGAGTGAGGGGGCAACAATTCTGACTGGTGGATCTCGCCCTAGGCATTTAAACAAGGGTTTCTTTATTGAACCAACTGTCGTTACTGATGTAACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTGAATTAGCAAATGACACCCAATATGGCTTAGCTGCTGCTGTGATATCAAATGATCTAGAAAGATGTGAACGCTTAACTAAGGCTTTTCAGGCGGGAATTGTATGGATCAATTGCTCTCAGCCGTGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGTTTTGGTCGTGAATTAGGAGAATGGGGGCTTGAAAACTACTTGAGTGTGAAGCAAGTTACTCAATATATATCAGATGAACCTTGGGGTTGGTACCAGTTTCCTTCAAAGCTGTAA 1611 0.442 MIMIHASNHHKILQLLLLNSVVFAFRRERSKAKMTITVPSRQLFLDGEWKEPILKKRIPVINPSTEFQIGEIPAATAEDVDLAVAAARRALVKNKGKDWATASGSVRARYLRAIAAKVMERKSELAELEAIDCGKPLDEALWDMDDVAGCFEYYADLADGLDAKQKAPIALPMQTFKSHVLREPIGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTCLELGQICRDVGLPPGVLNILTGLGLEAGAPLASHPHVDKIAFTGSSMTGSKIMSTAAQLIKPVSLELGGKSPIVVFGDVDLDKAVEWTMFGCFWTNGQICAATTRLIIHESIAEQFFDRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKVLKFISTAKSEGATILTGGSRPRHLNKGFFIEPTVVTDVTTSMQIWREEVFGPVLCVKTFSTEEEAIELANDTQYGLAAAVISNDLERCERLTKAFQAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYQFPSKL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2638 536 FunFam Betaine aldehyde dehydrogenase 296 487 - -
Acco04g2638 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 300 491 IPR016163 GO:0016620
Acco04g2638 536 CDD ALDH_F10_BADH 60 520 - -
Acco04g2638 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 320 331 IPR016160 GO:0016491
Acco04g2638 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 57 516 IPR016162 GO:0016491
Acco04g2638 536 PANTHER ALDEHYDE DEHYDROGENASE 34 535 - -
Acco04g2638 536 Pfam Aldehyde dehydrogenase family 56 518 IPR015590 GO:0016491
Acco04g2638 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 292 299 IPR029510 GO:0016491
Acco04g2638 536 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 45 308 - -
Acco04g2638 536 SUPERFAMILY ALDH-like 27 519 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2638 Acco-ChrAcco04 43244019 43248769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2638 34 536 Aldehyde Dehydrogenase Gene Family AT3G48170 80.119 0.0 879
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2638 04 43244019 43248769 Acco13g0652 13 4770072 4774011 CCT
Acco04g2638 04 43244019 43248769 Acco04g2638 04 43244019 43248769 ECH