Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco04g2620 | ATGTTGCTGAAGTTAGGGTTTTGGGTGGATCTAGGGTTTCGCGTCGCTGATTTGGGAAAATGCAAGGCTATGCATGGGCGTGGAGGTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAAGCGCTGTTCCCGATGTTTCTTCTTCATCTTCGCCTACAGCTAATTCATTCTATAAGGGTGGTCGTAAAATTAGTATCGGTGACTGTGCTCTCTTCAAGCCACCGCAGAAGTGTCCACCTTTTGTTGGAATAATTCGTTCGCTGACAGTTGGCAAAGAGGGTAAATTGAAGATACTTGTTAATTGGCTTTATCGGTCTGCTGAAGTAAACCTTGGCAAAGCTCTCCTGCTGGAGACTGCGCCAAACGAAGTTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTGCATCCCTTCTGCATCCTTGTAAAGTTGCATTTCTTCCCAAGGGCGTCGAACTTCCATCAGGGACTTCATCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAGATTATATTAATGTACTTCAAGAAGAAGTAGATCAGCTATTGTATAGGACTCGTATTGAAATGCATGCTACAGTGCAACCGGGTGGTCGATCTCCAAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGATAGTGTCCAGAATAGCGCTTCTTCTTTTCCTTCTCAAGTTAAGGGCAGGAAAAGGGAGAGGGTAGATCAAGGGCCTGAATCTGCCAAGCGAGAACGAACAACAAAAGTTGAGGATGGAGACTCTGGGCATTCTAGGCAGGAGAACATTTTAAAGACAGAGCTTGCAAAAATTACAGAAAAGGGGGTGCTTGTCAATGCTGAAGGGGTTGAGAAGCTTGTGCAGCTTATGCATCCCGATAGGAATGTAAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCTGCTGTTATTGCTGCGACAGATAAATTTGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTCTGCCGGTGTATGATGAATGGCTTCAAGAGGTTCATAAAAGGAAGATTGGTGATGGAAGTGGGTCTAAGGACAGTGATAAATCTGTTGAAGAATTTCTTTTGATATTACTTCGGGCACTTGATAAACTTCCTGTAAATCTTCAAGCTCTACAGACATGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAGAACTCAGAAATCCAGAGGAAAGCTAGGGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATTAATGATGCAAAAGCTGGTTCTGGTCAATCTGTCCCCTGGCCTACTAGGACACGCCTCTCTGAAGTTGGCCAGGGTGGGAATAAAAATTCAGGTGGATCATCTGATGTTGCTGTTAAGAGCTCGGTTACACAGCTCTCTGCATCCAGAACTTCCTCTGTGAAGATCGCCCAGGGAGAGAATGCTGCCAGATCTGCATCTCCTGGGTCTATGAAGTCAGTCCCCTCACCAACCTCAGCAACTATAAATTCAAAAGATGGACAGCCCCGTACTGCTGCTCTTAGTGGAGTTTCTGATCTCCCCATAGTAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAGTCTTGTTCCAGTGACCATGCTAAAACTGGGGGGTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACCGCCATGAGTGTGAATAAAATATCAGGCAATTCATCACGGCACCGAAAGTCTGTTAATGGAATCTCAGGTGCAACTCCATCTGGAGGGCAAAGGGAGTCTGTTCGAAATTCCTCTGGACACAAAAATTCATCTTCTGAAAAATTGTCTCAATTTGGATTAACAGAAAAGGCGCATGATGGGACTTCTCTTGAGGGAAGTACTCCCAAGCTGATTGTTAAGATTCCAAACCGAGGTCGGAGTCCAGCAGAAAGTGCAAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAACAGTCGAGCATCATCTCCTGTTTTTTCAGAGAAGAATGAGCATTATGATCATAGCTCAAAGGAAAAGATTGATTTTTATCGAGCTAATACTGGTGCGGATATTAATACTGAATCTTGGCAGAGTAATGATTTTAAAGATGTACTAACAGCATCTGATGAAGGCAATGGATCACCTACTGCTGTTACTGATGAAGAGCGCTGCAGGACTGTCAGTGATTCTAAGAAGATGACGGAAGCATCAAAAGCTGCTTCTTCATCATCTGGAAATGAAAATAAGGCAGTAAATACTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGCGTAAAGTATTCAGAAACTAATGCTTCCTTGTCTGCGGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCGGCTGGTGAGATATCCAAATCTGAATTGACAACCCCTGCTGGATCACCTGAAACAAACACTAATGCGGTTGAACAGTCATGTCCAGGTAATGCCATGGAGTGTGAAGGAAAGCTGGTTCAAAATGAATATCATGCAAGTACTGGCATTGATGATCATAAGAAGCAAGATATGGTATCTGGTGATTCACATGCTAATAATGATAATGATTTGGGTCTTTTGGCATCTGAAGTGAAGGTTCCTGAAGAGCAAAATAGGCATATTACTTCATCTAGTACGGGTTTGCAGTGGGTTGCAGAAGCCTGTCCAGAAAGCAAAGAAAAATCAAGTGAAATTCCAGTTGCCGCTGCATCATCTGGCCTTCCTGAAAGCGCAGTGCAAGAAGCCAGAGGTAGTGAATGTAGCAAACAGCGCAAGGAAAACAACACTGTTGGGAATGTTAATGCAGGTGAAGATCTTGATGTTAAACCTAATGAGGTTGCAATAGAAGTTGAGATGGACAATATTGACAAATTACATCCCTCTGTGGAGGTTGATCTGAAGGGTGAAGGTTGTATGATTGAGGAATCAAGCAGGTGTGGACAGACTGCTCAGAAGGTTCCTTTGGTGGTTATGCAGGAATCAGTGAAAGGAGGAACTGATGAGAATGTGTTACATCCTTCTGATGATTGTGTTGGTAAGGCTGTAGAAGACCACAGTGATAGAGAATGCAGAAAGACTGGCGATGTGGCTGCTCGAAGTCATGCAGGTCAGTGTGAAATTGAAAGAAATGAGTTTGAAAGTGTTGCTGTGACAACGCCTGAGAACAGAAGTACAACAGGTTTAGGTTCAGGTGACACTTGTCTTGCTTCTGAGCACGTGGAGGAGAATTCAGAAACAAAAGAGTCTCATGACCAACATGCTGGGCAGAATCTGCAGAGAGCTTCACTGAGCTTGCCTTCACAAGAAATGGAGCAGTGTCCTGGCTCTAAAGAATCTAAATCGACTGCCATTGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGACGCCTCTTCCATGTCTGCCACTGGTGTGTCTGATGTGGTAGATGCAAAAGTTGGGTTTGATTTAAATGAAGGCGTTAGTGCAGATGATGGAAAATCTGGAGAGTTCAATAGCATTCCTGAGCCTGGTTGTGCACCTGCTGTACGAGTGATCAGTCCAGTGCCATTTCCTGCTTCAACCATGTCTAGTGGTATTACTGCCTCAATCACTGTTGCTGCAGCTGCAAAGGGGCCATTTGTGCCACCTGAAGACTTGTTGAAAAGTAAAGGGGGGGAGCTTGGTTGGAGGGGATCAGCTGCCACCAGTGCATTCCGGCCGGCTGAGCCCAGAAAAATTTTAGAAATATCTCTTGGTACATCAGCAGCTCCTGTATCTGATGCCACAGCTGGAAAGCAGAATCGGCGATTATTAGATATTGACTTAAATGTGCCTGATGAAAGGATGCTTGATGATATAGCCTCTCAAGCTAGTTCTCGTCAGCCAGCAGATGGCATTTCCTCTGTTCGCTGCTCTGGAGGTCTTGGTCTTGACTTAAACCAAGTAGATGAAGCTTCTGATGTCGGCAATTGTTCCACAAGTAATGGTCATAAAATGGATGTACAATTTCTGCAGGTGAAACAATCATCCAATGCTCATCCAAATAAAGAGGCAAGTGCCCTCAGGGACTTTGATTTGAACGATGGGCCTGCTGTTGATGAAATCATCATGGAGCCAACATTGTTCATTCACCAATCCAGAAGCAATGCACCATCACAGCCCCCGGCATCTGGACCTAGAACGAGTAGTACTGAACTGGGGAGCTTCTCATCATGGTTTCCTTCAACTGGGAACACCTATTCAGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCGCAAAGAATGCTGGTTCCTGCTACTGGTGGCAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGCTATCATCTTCTGCAATGCCATATCCATCTTCGCCATATCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCATCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGACTTTTCTTTCCCACAGTAAATTCACAGTTTATTGGACCTGCCAGTACTGTTTCATCTCATTACACCGCCAGGCCTTATGTCTTTAGTCTTCCTGATGGTAGTGGTACTGCTGATGGTAATAAATGGAGAGGGCAGGGTTTAGATCTTAATGCTGGGCCTGGAGGTCCTGAAGTGGAGGGCAGAGATGACAGCTCAGCTCTGTTGCCAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCTGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG | 4935 | 0.446 | MLLKLGFWVDLGFRVADLGKCKAMHGRGGEERKRTRHMWTSPTRGQPIVSAVPDVSSSSSPTANSFYKGGRKISIGDCALFKPPQKCPPFVGIIRSLTVGKEGKLKILVNWLYRSAEVNLGKALLLETAPNEVFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGTSSFVCRRVYDIANKCLWWLTDQDYINVLQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASSFPSQVKGRKRERVDQGPESAKRERTTKVEDGDSGHSRQENILKTELAKITEKGVLVNAEGVEKLVQLMHPDRNVKKIDLASRSMLAAVIAATDKFDCLSQFVQLKGLPVYDEWLQEVHKRKIGDGSGSKDSDKSVEEFLLILLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQRKARGLVDTWKKRVEAEMNINDAKAGSGQSVPWPTRTRLSEVGQGGNKNSGGSSDVAVKSSVTQLSASRTSSVKIAQGENAARSASPGSMKSVPSPTSATINSKDGQPRTAALSGVSDLPIVNARDEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKISGNSSRHRKSVNGISGATPSGGQRESVRNSSGHKNSSSEKLSQFGLTEKAHDGTSLEGSTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNEHYDHSSKEKIDFYRANTGADINTESWQSNDFKDVLTASDEGNGSPTAVTDEERCRTVSDSKKMTEASKAASSSSGNENKAVNTQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEISKSELTTPAGSPETNTNAVEQSCPGNAMECEGKLVQNEYHASTGIDDHKKQDMVSGDSHANNDNDLGLLASEVKVPEEQNRHITSSSTGLQWVAEACPESKEKSSEIPVAAASSGLPESAVQEARGSECSKQRKENNTVGNVNAGEDLDVKPNEVAIEVEMDNIDKLHPSVEVDLKGEGCMIEESSRCGQTAQKVPLVVMQESVKGGTDENVLHPSDDCVGKAVEDHSDRECRKTGDVAARSHAGQCEIERNEFESVAVTTPENRSTTGLGSGDTCLASEHVEENSETKESHDQHAGQNLQRASLSLPSQEMEQCPGSKESKSTAIETEEAEECTSATADASSMSATGVSDVVDAKVGFDLNEGVSADDGKSGEFNSIPEPGCAPAVRVISPVPFPASTMSSGITASITVAAAAKGPFVPPEDLLKSKGGELGWRGSAATSAFRPAEPRKILEISLGTSAAPVSDATAGKQNRRLLDIDLNVPDERMLDDIASQASSRQPADGISSVRCSGGLGLDLNQVDEASDVGNCSTSNGHKMDVQFLQVKQSSNAHPNKEASALRDFDLNDGPAVDEIIMEPTLFIHQSRSNAPSQPPASGPRTSSTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLVPATGGSPFGPDVYRGPVLSSSAMPYPSSPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQFIGPASTVSSHYTARPYVFSLPDGSGTADGNKWRGQGLDLNAGPGGPEVEGRDDSSALLPRQLPVASSQALAEEQVRMFQLAGGVLKRKEPDGGWDSYKQSSWQ | 1644 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 576 | 634 | - | - | |
| Acco04g2620 | 1644 | SMART | BAH_4 | 71 | 186 | IPR001025 | GO:0003682 | |
| Acco04g2620 | 1644 | CDD | TFIIS_I | 360 | 436 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1077 | 1094 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1127 | 1150 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1076 | 1095 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1100 | 1119 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 728 | 775 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1127 | 1142 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1404 | 1426 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 444 | 531 | - | - | |
| Acco04g2620 | 1644 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 24 | 1644 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 673 | 688 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 218 | 248 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 212 | 283 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 756 | 775 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 728 | 744 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 545 | 569 | - | - | |
| Acco04g2620 | 1644 | ProSiteProfiles | BAH domain profile. | 71 | 186 | IPR001025 | GO:0003682 | |
| Acco04g2620 | 1644 | Pfam | TFIIS helical bundle-like domain | 386 | 435 | IPR017923 | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1100 | 1116 | - | - | |
| Acco04g2620 | 1644 | Pfam | BAH domain | 73 | 179 | IPR001025 | GO:0003682 | |
| Acco04g2620 | 1644 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 303 | 439 | IPR035441 | - | |
| Acco04g2620 | 1644 | ProSiteProfiles | TFIIS N-terminal domain profile. | 359 | 438 | IPR017923 | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 249 | 283 | - | - | |
| Acco04g2620 | 1644 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 340 | 449 | IPR035441 | - | |
| Acco04g2620 | 1644 | Gene3D | - | 58 | 302 | IPR043151 | - | |
| Acco04g2620 | 1644 | SMART | TFS2_5 | 358 | 437 | IPR003617 | GO:0005634 | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 1568 | 1595 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 946 | 966 | - | - | |
| Acco04g2620 | 1644 | MobiDBLite | consensus disorder prediction | 441 | 698 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco04g2620 | Acco-ChrAcco04 | 43068388 | 43074613 | Wgd |
Transcription factors information