Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2603 ATGGCCAGTGTTACTCATAAGACTCATCAAATAGGTGATACCGTGAGGTATTCAACCCTTGAATCGCCTCTCTCTTCATTGCAAGCTCCTTATTACACAGCTATAAATGAGAAAGAACAACCGTCTCCTTCTTCAACTGTAAGCAAAATCAGCCCACTTATTCTGTTGGTAATAATTGTACTGGCAATCATCTTCTTCATCTATGGAATCATTCATTTGGTTCTTTGGCTTCTAATGAGAACTCAACCATCATCTTCACCTCTATATCATTCCAATAGATTTCCAGAATCCACACGCTCTCGTGGTTTTCAAAGGCAGCTTCATCATCTCTTTCGCTTACATGATTCAGGATTAGAACAGTCTCTCATAGATGCGCTTCCTGTTTTTTACTACGAGGATGTCTTGGGTTTGAAAGAACCATTTGATTGTGCTGTGTGTCTCTGTGAATTCTCTGAGCAGGACAAGCTAAGGTTGTTGCCAATATGTGGCCATGCTTTTCACATCAGTTGTCTTGACACTTGGCTCCTCTCAAATTCCACATGCCCTCTTTGCAGAGCGACAATCTCATCAAGTTCAGATTTTTCTGTGGAAAATCCATTGCTCAATAATGATAATTCATGGGTTTTAAACAGATTCAAAAGAGATGAAGAGAATGCCAATGGGTGTTCACATACTGAGAAAGTTCTGGGTAATGAAGATCGAATTACAGAAAAAAGGGTTTTTTCTGTGAGGCTTGGAAAGTTCAGAAACATTGATGGAGGAGAGGTAGAGGTTGGAGAAGAAGAAGAAGAAGGTAGTAGTTGTAATATGGATGGAAGGAGATGCTTCTCCATGGGATCTTATCAATATGTGGTGAGTGGTTCAAATCTGCAAGTGGTTCTTTCTGATGTTTCAGACAATGAGGAAGCTGTGGAGGGGAAGAAGATAGGAGATAGAATCAGAGGTGAGAGCTTCTCTGTGTCAAAAATATGGCTTTGGTCTAACAAGAGCAAGTTTCGAAGTTCTTCTGATGATGCTGCTTTCCCTTGGTTACTGTAA 1038 0.4037 MASVTHKTHQIGDTVRYSTLESPLSSLQAPYYTAINEKEQPSPSSTVSKISPLILLVIIVLAIIFFIYGIIHLVLWLLMRTQPSSSPLYHSNRFPESTRSRGFQRQLHHLFRLHDSGLEQSLIDALPVFYYEDVLGLKEPFDCAVCLCEFSEQDKLRLLPICGHAFHISCLDTWLLSNSTCPLCRATISSSSDFSVENPLLNNDNSWVLNRFKRDEENANGCSHTEKVLGNEDRITEKRVFSVRLGKFRNIDGGEVEVGEEEEEGSSCNMDGRRCFSMGSYQYVVSGSNLQVVLSDVSDNEEAVEGKKIGDRIRGESFSVSKIWLWSNKSKFRSSSDDAAFPWLL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2603 345 CDD RING-H2_EL5-like 142 185 - -
Acco04g2603 345 SUPERFAMILY RING/U-box 122 191 - -
Acco04g2603 345 FunFam E3 ubiquitin-protein ligase ATL6 106 191 - -
Acco04g2603 345 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Acco04g2603 345 SMART ring_2 143 184 IPR001841 -
Acco04g2603 345 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 46 324 - -
Acco04g2603 345 Pfam Ring finger domain 142 185 IPR001841 -
Acco04g2603 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 194 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2603 Acco-ChrAcco04 42913720 42914757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2603 38 336 C3H Transcription Factor Family AT2G18650 40.233 2.48e-56 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2603 04 42913720 42914757 Acco04g2603 04 42913720 42914757 ECH