Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2597 ATGGTGGCTAGATCTTGCACAAACTTGTCGGGCTTGGTGTCTGGGGACATTTTGAATTTCCCTCAAACATCCAGAGCTCTTCCGCGTACTAATACTGTTCCTGGAGTTATTTCTGATATAGATACTGGTGACAGTGGTTCACATGCTTCCTCATCAGAACCTCGTCAAAAGATAATCATTGTAGCAAATTTTCTTCCCCTTAATGCTCAAAAGGATAAAGATTCAGGAAGATGGTGCTTTGGTTATGATGAAGACTCAATTTTGTGGCAGCTAAAAGATGCTATTTCTTTTGATGCCGATGTTGTTTTTGTGGGATCTTTGGAGGTTGATGTTGATGAAAGTGAACAAGAGAAAGTTTCTCAAGAGCTGCTTGATGAATTCAAATGCTGGCCTACCTTCCTTCCAGTGCTCATTCAGAATAGGTTTTATGATGGGTTTTGCAAGCAACATTTGTGGCCACTATTTCATTACATGTTACCTATGTTTCCCGATCATGGCAATCGCTTTGATAGGGTTCTTTGGCAGGCTTATGTTGCTGCTAATAGGATATTTGCAAGAAGGGTTTTTGAGGTTATGAATCCAGAAGTTGATTATGTATGGGTTCATGATTATCATCTGATGGTTCTCCCAACATTTCTCCGGAAAGGGTACAGTAAAGTCAAGATAGGATTTTTCCTCCACAGCCCTTTTCCTTCGTCAGAAATTTATCGGACTCTGCCCGTCAGGGATGAAATTTTGAAAGCACTTCTCAATGCAGATTTAATTGGGTTTCATACATTTGATTATGCTCGCCACTTTTTATCTTGTTGTAGTCGAATGCTTGGCTTGGAATATGAATCCAAAAAGGGCTACATTGGGCTGGAATACTTCGGGCGCACAATATACATTAAGATCTTGCCAGTAGGAATTCACATGTCTAGGCTTCAATCTGCCATAAATCACCCATCTTCTATTGTCAAAGCTCAAGAAATTTGTGAGCAATTTAAGGGGAAGCAACTTATTCTCGGTGTTGATGATATGGACATCTTTCAAGGAGTCAGTTTGAAGCTCTTGGCTATTGAATTACTCCTAGAGCAGAATCCAGAACTGCTAGGTGAATTAGTACTAGTCCAAATTGTAAATCCCTCAAAAAGTTCAGGCAAAGACGTTGAGGAAGCAAAGAAGGAGATACACACTATTGCTAACAGGATAAATGAAAGATTCACTTGTCCAAATTATGAACCTGTGATCATCATAGATCATCCTGTTCCCTTCTATGAGAAGATAGCCTATTACTCTTTGGCAGAATGTTGCATTGTGAACGCTGTGCGGGATGGTATGAATTTAATTCCATATGAATATATCGTCTGTAGGCAGGGGAATATGCAAATGGATCAAGCCTTAGGAATTATTCCAGGCTTGCCTCGTACAAGTGCACTTGTTGTTTCTGAGTTCGTCGGTTGCTCGCCATCTCTTAGTGGGGCATTGAGGGTGAACCCATGGGACATTAGTGCTGTAGCTGATGCAATAAATTTGGCCATCAATATGTCTATCATAGAGAAACAGTTGCGGCATGAGAAGCACTATAGGTATGTTAGCTCTCATGACATGGGTTATTGGGCTCGAAGTTTTGTACAAGATCTGGTTCGTTCATGCCAGGATCACCTCAGCAAACGTTGTTGGGGTATTGGCTTTGGGCTGAGCTTCAGAATCCTGGCCCTTTCTCCCAGTTTTAGGAAGCTGTCAATTGGCCACATCGTCTCTGCATATAAAAGGTCAAATCAGCGAGCAATTTTTCTGGACTATGATGGTACACTCGTGTCCCAAACTTCCATTGTCAGAAGTCCCAGTCCTGAAGTCATATCTTTGCTAAACAACCTATGCAGTGACCCCAAGAACAGTGTGTTTATAGTTAGCGGTAGGGGAAGGGCTTCACTGGGTGAGTGGTTAAATCAGTGTGAGAACCTTGGTATCGCGGCTGAGCATGGTTATTTTATAAGGTGGGATGGACAATCAAGTTGGGAAACAAATCATATAGCTACAGATTTTGATTGGAAAAGCATTGTTGAACCTGTGATGAGATCATATACTGAGGCAACTGATGGCTCTCAAATGGAGATCAAGGAGAGCGCGATGGTTTGGCACCATCGTGACGCTGATCTTGATTTTGGATCTTGGCAGGCCAAGGCACTGCTGGATCACCTTGAAAATGTCCTTTCAAATGATCCAGTGGTTGTTAAGAAGGGACAATACATTGTTGAAGTTAAACCACAGGGAATCACTAAAGGGTTAGTTGTAGAAGAGGTTCTGTCTCGACTGATCGGGACAGGGAAATCACCAGATTTCATTCTGTGCATTGGGGATGATAGGTCTGATGAGGACATGTTCGAGAGCATATCGACCAAAGTCTATGGAGGAGGAAGCAGCCCACCTTCAGCACCGGAAATCTTTGCTTGCACAGTTGGCCAGAAACCAAGCAAAGCCAGGTACTACCTAGACGATACTGCTGAGGTGATGATGCTGCTTAAAAGCCTTGGTACTGCTTCAAGGCTTAAACCGGTATGTGATGAAGAAGAATGTCATTCTGAAACAGTTGCTTGA 2580 0.424 MVARSCTNLSGLVSGDILNFPQTSRALPRTNTVPGVISDIDTGDSGSHASSSEPRQKIIIVANFLPLNAQKDKDSGRWCFGYDEDSILWQLKDAISFDADVVFVGSLEVDVDESEQEKVSQELLDEFKCWPTFLPVLIQNRFYDGFCKQHLWPLFHYMLPMFPDHGNRFDRVLWQAYVAANRIFARRVFEVMNPEVDYVWVHDYHLMVLPTFLRKGYSKVKIGFFLHSPFPSSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKKGYIGLEYFGRTIYIKILPVGIHMSRLQSAINHPSSIVKAQEICEQFKGKQLILGVDDMDIFQGVSLKLLAIELLLEQNPELLGELVLVQIVNPSKSSGKDVEEAKKEIHTIANRINERFTCPNYEPVIIIDHPVPFYEKIAYYSLAECCIVNAVRDGMNLIPYEYIVCRQGNMQMDQALGIIPGLPRTSALVVSEFVGCSPSLSGALRVNPWDISAVADAINLAINMSIIEKQLRHEKHYRYVSSHDMGYWARSFVQDLVRSCQDHLSKRCWGIGFGLSFRILALSPSFRKLSIGHIVSAYKRSNQRAIFLDYDGTLVSQTSIVRSPSPEVISLLNNLCSDPKNSVFIVSGRGRASLGEWLNQCENLGIAAEHGYFIRWDGQSSWETNHIATDFDWKSIVEPVMRSYTEATDGSQMEIKESAMVWHHRDADLDFGSWQAKALLDHLENVLSNDPVVVKKGQYIVEVKPQGITKGLVVEEVLSRLIGTGKSPDFILCIGDDRSDEDMFESISTKVYGGGSSPPSAPEIFACTVGQKPSKARYYLDDTAEVMMLLKSLGTASRLKPVCDEEECHSETVA 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2597 859 Gene3D Glycogen Phosphorylase B; 311 526 - -
Acco04g2597 859 NCBIfam HAD-IIB family hydrolase 590 794 IPR006379 -
Acco04g2597 859 NCBIfam trehalose-phosphatase 587 838 IPR003337 GO:0003824|GO:0005992
Acco04g2597 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 588 705 - -
Acco04g2597 859 CDD HAD_TPP 590 833 - -
Acco04g2597 859 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 851 - -
Acco04g2597 859 Pfam Trehalose-phosphatase 592 828 IPR003337 GO:0003824|GO:0005992
Acco04g2597 859 MobiDBLite consensus disorder prediction 31 53 - -
Acco04g2597 859 Gene3D Glycogen Phosphorylase B; 48 310 - -
Acco04g2597 859 Gene3D - 671 751 - -
Acco04g2597 859 Pfam Glycosyltransferase family 20 57 541 IPR001830 GO:0003824|GO:0005992
Acco04g2597 859 Gene3D - 591 825 IPR023214 -
Acco04g2597 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 839 IPR001830 GO:0003824|GO:0005992
Acco04g2597 859 SUPERFAMILY HAD-like 589 839 IPR036412 -
Acco04g2597 859 FunFam Alpha,alpha-trehalose-phosphate synthase 311 526 - -
Acco04g2597 859 FunFam Trehalose-6-phosphate synthase 2 672 751 - -
Acco04g2597 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 50 309 - -
Acco04g2597 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 57 544 - -
Acco04g2597 859 CDD GT20_TPS 57 541 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2597 Acco-ChrAcco04 42876630 42879441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2597 1 842 Trehalose Biosynthesis Gene Families AT1G23870 65.880 0.0 1213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2597 04 42876630 42879441 Acco13g0636 13 4648962 4651689 CCT