Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2589 ATGGAGAAGGACTCTCAAATTGGTTCTGCATCTCAAAAACTCTCCCTATTCTTCTTGTCTCAGTCTCAAATCCAAAAAAGAAAAAAAAATATGAAGAAAAGAAGTAGTGAATCGTCCTCAAAAGTGGACCGCAAAACCATAGAAAGGAATCGCAGAATTCACATGAAAGCTCTTTGCTTCAAGCTCGCTTCTCTTATCCCTCCCCACCACTTAAAACACACCAAGGACATGATATCGCAGCAAGATCAGCTGGATATAGCAGCGAGCTACATAAAGAATCTGAGGGAGAAACTTGAGAAGCTGAAGGGGAAAAAGGAAGAAGCCATGAAATTAAAGGAAACAAACACTAGTAACAACAATCTGCAAGCTGGAACGGAGAACAATATGTTCATGGCTTCTAATCTGCCATTACTCGAGCTCAGAGACTTAGGTTCCAGCATCGAAGTGATGCTTATCAGTGGACTGAACAGAAACTTCATGTTATATGAAGTAATTAGTGTCCTTGAAGAAGAAGGAGCTGAAGTTGTGAGCGCAAGTTTTTCCACTGTGGGTGATAAGATATTCCACACTGTTCATGCCCAGGTGAAAATATCTAGAGTTGGAGTAGAAACCACAAGAGTGTACCAGAGGCTTCATGATTTGGTTGCTCCACTCAAAAGCTGGGAGTATTTTTAA 675 0.4089 MEKDSQIGSASQKLSLFFLSQSQIQKRKKNMKKRSSESSSKVDRKTIERNRRIHMKALCFKLASLIPPHHLKHTKDMISQQDQLDIAASYIKNLREKLEKLKGKKEEAMKLKETNTSNNNLQAGTENNMFMASNLPLLELRDLGSSIEVMLISGLNRNFMLYEVISVLEEEGAEVVSASFSTVGDKIFHTVHAQVKISRVGVETTRVYQRLHDLVAPLKSWEYF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2589 224 Gene3D - 29 124 IPR036638 GO:0046983
Acco04g2589 224 SMART finulus 45 100 IPR011598 GO:0046983
Acco04g2589 224 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 31 214 - -
Acco04g2589 224 MobiDBLite consensus disorder prediction 25 48 - -
Acco04g2589 224 Pfam Helix-loop-helix DNA-binding domain 43 94 IPR011598 GO:0046983
Acco04g2589 224 FunFam Transcription factor bHLH162 31 122 - -
Acco04g2589 224 Coils Coil 84 114 - -
Acco04g2589 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 94 IPR011598 GO:0046983
Acco04g2589 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 32 106 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2589 Acco-ChrAcco04 42788465 42789455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2589 39 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.612 3.43e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco04g2589 HLH 4.9e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2589 04 42788465 42789455 Acco04g2589 04 42788465 42789455 ECH