Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2571 ATGCTTCACTCATTTTCTGTTTCACTCTCTGCCATGGATCTGGATACAAAGATCAGACAAAACTATGTCTCCCAACATTCAATGCAGTTGCAAGAAATGGAAGCAAAATCCAACGTAGAAGATCTCGAGCTTTCTAATTTTGGTGTTCCTTCATCACAGGGTAATAATTTCCTGCAAGATTTACTCCTTATAGATCCATTTCAAGCATATGGGTCTTCATCAAATCCAGTAACTACTGGGTTCCAAACTGCAAATTTTGTTAACCCTTTTGATAGTTTTTCCTTTGGCTGTTCATCATCATCAGCAATAGATTTTGATGTTTATGAGTCAAAACCATTTACTGAAAATATTAATGGCAACAAAGTTATGGAGAATACTTTCCAGTTTGGAGGTAATAATCATAGCTTCAACGTCGTCTCTCAAGAGAGGAATCAGATGGAAATGGTGGGTGCAGATAACCTGATGAGCAGTTATTATTTGCCGTTTGATTCTCAAGAAACCAACAAGAATATGAATTTTGTGGTACCAGAAGATGAAGTATCAATATTAATATCTGCAGATCATAGTTTTCTCAGAAGGGTTGGTTTGAATAATAATAAGAAGAATAGAAGGTTATCATCAACTTCAATCAGAAGGGCATGCAAAGTTCGGAACAAGTCCAACGTAGTAAAGGGACAGTGGTCGGTGGAAGAGGATAGGCTGCTAATTCAAATGGTTGAACAATACGGAGTGAGAAAGTGGTCTCATATTGCTCAGAGTTTGCCTGGCAGAATAGGAAAACAATGCCGAGAGCGTTGGCATAATCATCTAAGGCCTAACATCAAGAAGGAGACATGGAGTAATGAAGAGGACAAGATACTGATCGAAGCACACATAGAGATAGGAAATAAATGGGCAGAGATTGCAAAGAAGTTGCCTGGAAGAACTGAAAACTCCATAAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCCAGAAGAAAGTGTCGCTCGAAGCGCCCTAGACCTTCTCTTCTTCAAGACTACATCAAGAGCTTGAACTTAGACAAAAACCCACCCAAAGATTACCGGAAAAGATCCTCTTCTTCTGCTAACCCCAACAACAACAACAAGAATCCTATGACTGGTACAACAAAGAAAGCATCATCATCAGCTACACCGGCATTGAGTGAGCAGTTTTGTCCCAACAACGACAGATTAGTTCCTACATATGACTTCAACGAGGTCCCAGACTTTTGTGTCGATGAGAACACAACTTTGTTTCAAGAGGGGTGCAATCTTGATTCTTTGCTTGATGATATGCCTTGTGATTCTGACTATATTGTGCAAGGAGGAGACTTTGAAGCAAAGTTGCAATTTTTTGGTGATGTCGTTGTTAATAATAGTATTTATCTTGATGGAGATGATCAGTTTGATTCAGGAAAATCACAGAATGATGAGGAGGTCGAAGTTAACAAGGAGATGGATTTGATGGAGATGATGTCTCAGATCAAAGATGTGCTTTGA 1509 0.3903 MLHSFSVSLSAMDLDTKIRQNYVSQHSMQLQEMEAKSNVEDLELSNFGVPSSQGNNFLQDLLLIDPFQAYGSSSNPVTTGFQTANFVNPFDSFSFGCSSSSAIDFDVYESKPFTENINGNKVMENTFQFGGNNHSFNVVSQERNQMEMVGADNLMSSYYLPFDSQETNKNMNFVVPEDEVSILISADHSFLRRVGLNNNKKNRRLSSTSIRRACKVRNKSNVVKGQWSVEEDRLLIQMVEQYGVRKWSHIAQSLPGRIGKQCRERWHNHLRPNIKKETWSNEEDKILIEAHIEIGNKWAEIAKKLPGRTENSIKNHWNATKRRQYSRRKCRSKRPRPSLLQDYIKSLNLDKNPPKDYRKRSSSSANPNNNNKNPMTGTTKKASSSATPALSEQFCPNNDRLVPTYDFNEVPDFCVDENTTLFQEGCNLDSLLDDMPCDSDYIVQGGDFEAKLQFFGDVVVNNSIYLDGDDQFDSGKSQNDEEVEVNKEMDLMEMMSQIKDVL 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2571 502 MobiDBLite consensus disorder prediction 359 395 - -
Acco04g2571 502 ProSiteProfiles Myb-like domain profile. 219 270 IPR001005 -
Acco04g2571 502 SUPERFAMILY Homeodomain-like 221 317 IPR009057 -
Acco04g2571 502 SMART sant 275 323 IPR001005 -
Acco04g2571 502 SMART sant 223 272 IPR001005 -
Acco04g2571 502 MobiDBLite consensus disorder prediction 320 334 - -
Acco04g2571 502 MobiDBLite consensus disorder prediction 312 395 - -
Acco04g2571 502 PANTHER MYB PROTEIN-RELATED 197 380 - -
Acco04g2571 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 219 274 IPR017930 -
Acco04g2571 502 CDD SANT 227 270 IPR001005 -
Acco04g2571 502 Pfam Myb-like DNA-binding domain 227 285 - -
Acco04g2571 502 CDD SANT 278 321 IPR001005 -
Acco04g2571 502 Gene3D - 223 275 - -
Acco04g2571 502 FunFam Transcription factor MYB119 277 341 - -
Acco04g2571 502 Gene3D - 277 329 - -
Acco04g2571 502 ProSiteProfiles Myb-like domain profile. 271 321 IPR001005 -
Acco04g2571 502 FunFam Transcriptional activator Myb isoform A 223 276 - -
Acco04g2571 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 275 325 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2571 Acco-ChrAcco04 42612062 42614582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2571 76 445 MYB Transcription Factor Family AT4G18770 49.740 4.65e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco04g2571 Myb_DNA-bind_6 7.3e-19 CL0123