Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco04g2537 | ATGAACCCTTACGACAACAGATATACAGATTCGACTTCTTATCGCAACCGCAGGAGTGATTTAAACGGATCTATGCGGCCGATGGTCCCTTCAATGATTGGCGGTGCCAGCTCGAGTTACGGTCGGGGAGGTCCTGCACCGGTTGGTTATAATATGGGTGGAAGAGGTGCTGGGAGCGCTTTTGGAACGGCACCTGCTGCCCCAAATTATAATGAGTTGCCGCCGTTCATGCCACCTCCTGGAGGCTTTGACGTAGGTCGCGGTGGTGGTGCTAGCCAAAGGGGCTTCGGCGGTAGACTTGGAGACGGCCATTTTAGTGATAGAAAAGATGACGTAGGTCGTCGTGGCGGTGGAAGAGATCGGGAAGGTGGTAGATTTGGTGGACGTCACGGAGACAAGCTCTCGGGGAGAGGAGGTGGGTTTGGAGGTAGAGGTTTTGGTGGAAGCGCAGGATTTGGCGGTGGCCGTGGTGGTGGTGGTAGAGGAGGAAGACATGGTGGATCTTCCAAGGATGACTTGGACAACATAGCACTTCCCAAGCAAGATTTTAGAAATTTGATTCCATTTGAGAAGAATTTTTACATCGAAAGCCCGTCGGTGGCGGCCATGTCTGATCATGAGCTTATGGCTTACCGTGCAACTAAGGAGATCACAGTGCAAGGGCATGACATTCCTAAACCAATTCGAACTTTTCGAGATGCAAATTTTCCTGATTACTGTCTTGAGGTGATTGCTAAGTTGGGTTTTGTGGAGCCTACACCAATTCAAGCTCAAGGTTGGCCCATGGCTCTGAAGGGTAGAGATTTGATTGGCATTGCTGAGACTGGCTCAGGAAAAACACTCGCATATCTGCTTCCTGCTTTAGTGCATATCAGTGCACAACCTCGATTGGTACAAGGTGAAGGTCCCATCGTCTTAGTTCTGGCTCCAACTAGAGAGTTAGCTGTTCAAATTCAGGAAGAAGCTGTAAAATTTGGCTCTCGAGCAAATATCAGAAGTACTTGCATCTATGGTGGTGCCCCAAAGGGACCTCAAATTCGTGATCTTAAGAGAGGTGTTGAAATTGTTATTGCTACACCTGGTCGCCTAATTGATATGTTGGAAGCTCAGCATACCAATCTGCGAAGGGTGACTAACCTTGTGTTGGATGAAGCTGATCGAATGCTGGACATGGGCTTTGAACCTCAGATAAGAAAAATTATTGGGCAGATCCGGCCTGATAGACAGACATTGTACTGGAGTGCAACATGGCCAAGAGAGGTTGAAACTCTGGCAAGGCAGTTTCTACGCAACCCATACAAGGTAATTATTGGATCGCCAGATTTGAAAGCAAATCAATCTATAAATCAAGTTGTTGAAGTTTTAACAGAAGCGGAGAAATACAATAGATTGATCAGATTGCTTAAAGAAGTGATGGATGGGAGTCGAATTCTGATATTTATTGAGACAAAAAAGGGCTGCGATCAAGTTACAAGGCAATTGAGAATGGATGGATGGCCTGCACTTTCTATCCATGGTGATAAAAACCAGGCTGAAAGGGACTGGGTCTTGGCTGAATTTAAGAGTGGCAGAAGTTCAATAATGACTGCCACTGATGTTGCTGCACGGGGTCTTGATGTGAAGGACATTAAATGTGTGATCAATTATGATTTCCCATCAAGCCTGGAAGATTATGTCCACCGAATTGGTCGAACAGGGCGTGCAGGGGCTAAAGGAACCGCCTTCACCTTTTTCACGCATGCAAACGTCAAGTTTGCCAGGGACTTGATCAAGATCTTACAAGGTGCTGGCCAGGTTGTGAGTCCTGCTCTATCTGCCTTGACTCGGTCAGCTGGTTCTGGTCATTTTGGATCTGGGGGAAACTTCCGCTCCAGGGGACGGGGAGGTTATGGCAATCGAGGTCACATATCTGGATCCAATATCATTCCTCTGGGTTCAAGGAAACCATGGTAG | 1953 | 0.4736 | MNPYDNRYTDSTSYRNRRSDLNGSMRPMVPSMIGGASSSYGRGGPAPVGYNMGGRGAGSAFGTAPAAPNYNELPPFMPPPGGFDVGRGGGASQRGFGGRLGDGHFSDRKDDVGRRGGGRDREGGRFGGRHGDKLSGRGGGFGGRGFGGSAGFGGGRGGGGRGGRHGGSSKDDLDNIALPKQDFRNLIPFEKNFYIESPSVAAMSDHELMAYRATKEITVQGHDIPKPIRTFRDANFPDYCLEVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHISAQPRLVQGEGPIVLVLAPTRELAVQIQEEAVKFGSRANIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTNLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSPDLKANQSINQVVEVLTEAEKYNRLIRLLKEVMDGSRILIFIETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSSIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHANVKFARDLIKILQGAGQVVSPALSALTRSAGSGHFGSGGNFRSRGRGGYGNRGHISGSNIIPLGSRKPW | 650 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco04g2537 | 650 | Gene3D | - | 202 | 437 | IPR027417 | - | |
Acco04g2537 | 650 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Acco04g2537 | 650 | MobiDBLite | consensus disorder prediction | 101 | 132 | - | - | |
Acco04g2537 | 650 | CDD | DEADc_DDX5_DDX17 | 241 | 435 | - | - | |
Acco04g2537 | 650 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 208 | 606 | - | - | |
Acco04g2537 | 650 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Acco04g2537 | 650 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 229 | 257 | IPR014014 | GO:0003724 | |
Acco04g2537 | 650 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 302 | 589 | IPR027417 | - | |
Acco04g2537 | 650 | SMART | helicmild6 | 488 | 569 | IPR001650 | - | |
Acco04g2537 | 650 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 381 | 389 | IPR000629 | - | |
Acco04g2537 | 650 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 463 | 608 | IPR001650 | - | |
Acco04g2537 | 650 | FunFam | ATP-dependent RNA helicase RhlB | 439 | 611 | - | - | |
Acco04g2537 | 650 | Pfam | Helicase conserved C-terminal domain | 459 | 569 | IPR001650 | - | |
Acco04g2537 | 650 | Gene3D | - | 438 | 611 | IPR027417 | - | |
Acco04g2537 | 650 | FunFam | probable ATP-dependent RNA helicase DDX17 | 191 | 438 | - | - | |
Acco04g2537 | 650 | Pfam | DEAD/DEAH box helicase | 253 | 424 | IPR011545 | GO:0003676|GO:0005524 | |
Acco04g2537 | 650 | CDD | SF2_C_DEAD | 448 | 578 | - | - | |
Acco04g2537 | 650 | MobiDBLite | consensus disorder prediction | 86 | 175 | - | - | |
Acco04g2537 | 650 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 260 | 435 | IPR014001 | - | |
Acco04g2537 | 650 | SMART | ultradead3 | 248 | 451 | IPR014001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco04g2537 | Acco-ChrAcco04 | 42208314 | 42212210 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco04g2537 | 226 | 589 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 36.264 | 4.50e-72 | 237 |