Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2534 ATGGCGCCGTGTTTCGCTGCCATGGGGACAATCTTCCTCCTCCTCTTATTCCTCATCATCCTCACCTCTCCCGTCTCTGCACTCGACTTCCTCTTCAATTTCTTCAATGGCACCATCAATGGCACCGACCTTACTCTCATCAACGACGCTCGCGTCGACCATAACGTCATCAGAATGACCAACGACTCCAACCAGTACTCCTTTGGACGAACCTTCTATCCCACCGCCATCGCTATGAAATCCAACTCTAATTCCTCCAACATTTCTTCGTTCTCCACTTCCTTCGTCTTCTCCATTTTGCCCCAGATCTCAACTAGCCCAGGTTTCGGTCTTGCCTTCGTTCTCACCAGTACCATGTCTCCGCCCGGCGCTCTCGCCAGTCAGTACTTTGGTCTTTTCACAAACGCCACACATCCCACCGTCGCTCCCCTGTTCGCAGTTGAATTCGATACGGGTCAGAACCCAGAGTTCAACGACCCAGATGATAACCACATCGGAATCGATCGGAACAACGTTGAATCCATCGTCACGAAATCCGCTGGCTACTATAATTCCACTGGTGGTTTCGTGCCTATTCGAATGCGTAGTGGTCGTAACGTTAGAGCTTGGATCGATTTTAATGGCACAAATTTGGAGATAAATGTTACGGTGGCGCCAGTTGGCGTTGCTCGCCCATCTACGCCGACGCTTTCGTATAGAGATCCCGTTATAGCTAATTACGTGTCTGCAGAGATGTATGTTGGATTTTCTGCATCGAAAACGAATTGGGTTGAAGCACAGAGGCTTCTAGCTTGGAGCTTCAGCGACAGTGGACCTGCGAGAGACATTACTACGGCAAATTTGCCAGTATTTGAGCCAGAATCGTCGTCTTCGAAGCTTTCTGGTGGGGCGATTGCCGGGATCGTTATCGGATGCCTTGCTTTTATGATGATTAGTGGTTCTGGATTTTACCTGTGGTGGCGAAACAAGAAATTGAAAGAGCAAGAGGACGAAATTGAAGATTGGGAGCTGGAGTATTGGCCCCACAGATTCTCATACGAGGAGCTCAGCGTGGCTACTGATGAATTTCGCAAGGAGAATCTCTTAGGTTCAGGAGGATTTGGAAGAGTCTACAAAGGAACACTAACGAACAACACTGAAATTGCAGTCAAATGCGTCAACCACGATTCCAAGCAAGGGTTACGAGAATTTATGGCGGAGATCTCGAGCATGGGCCGGCTTCAACACAAGAATCTGGTTCAAATGAGAGGATGGTGCAGAAAAGGGAACGAGCTCATGCTTGTCTACGACTACATGGCCAACCGAAGTCTGAACAAATGGATCTTCGACAAACCTGAGAAGCTTCTAGGCTGGGAACGACGTCGTCGAATCCTCGTCGACGTCGCCGAAGGGCTAAACTATCTACACCATGGTTGGGATCAAGTGGTCATACACAGAGACATTAAATCGAGCAACGTATTGCTGGATTCGGAAATGAGAGGTAGATTGGGAGATTTTGGTCTCGCTAAGCTTTATCAACAAGGTGAGGTTCCAAATACGACGAGAGTGGTAGGTACGTTAGGGTATTTGGCACCTGAGCTGGCGTCGGTGGCTTTGCCGACGTCGGCGAGCGATGTGTACAGCTTCGGAGTGGTGTTGTTGGAGGTTGCGTGCGGGCGAAGACCGATTGAGACGTCGGCGCCGGAGGAGGAGGTGGTGCTAATTGATTGGGTGAGGGATTTGTATGCGAAAGGGAGTGTGGTTGAGGCGGCGGATTCAAGGATTAAGGGTGAGTATGAGGAGGGAGACATGGAGATGATTTTGAAGCTTGGTTTAGCTTGCTGTCACCCTGATCCGCCGAGGAGGCCGACCATGAAGGAGGTTGTTGTGCTGTTGGTGGGCGAGGAACTCTCGGCGGCGCCGGTGGAATCGTTGTCTGAGTTAGCTCGCGGTACAGTGAATGGTGACGGCGACTATGAATCACAAGAGGCGGCGCTAGGGGGGTCAACGCATGCGGTTTAA 2001 0.5047 MAPCFAAMGTIFLLLLFLIILTSPVSALDFLFNFFNGTINGTDLTLINDARVDHNVIRMTNDSNQYSFGRTFYPTAIAMKSNSNSSNISSFSTSFVFSILPQISTSPGFGLAFVLTSTMSPPGALASQYFGLFTNATHPTVAPLFAVEFDTGQNPEFNDPDDNHIGIDRNNVESIVTKSAGYYNSTGGFVPIRMRSGRNVRAWIDFNGTNLEINVTVAPVGVARPSTPTLSYRDPVIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDSGPARDITTANLPVFEPESSSSKLSGGAIAGIVIGCLAFMMISGSGFYLWWRNKKLKEQEDEIEDWELEYWPHRFSYEELSVATDEFRKENLLGSGGFGRVYKGTLTNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMANRSLNKWIFDKPEKLLGWERRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELASVALPTSASDVYSFGVVLLEVACGRRPIETSAPEEEVVLIDWVRDLYAKGSVVEAADSRIKGEYEEGDMEMILKLGLACCHPDPPRRPTMKEVVVLLVGEELSAAPVESLSELARGTVNGDGDYESQEAALGGSTHAV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2534 666 Pfam Legume lectin domain 28 281 IPR001220 GO:0030246
Acco04g2534 666 PANTHER - 53 628 - -
Acco04g2534 666 SUPERFAMILY Protein kinase-like (PK-like) 332 625 IPR011009 -
Acco04g2534 666 Gene3D - 26 281 - -
Acco04g2534 666 FunFam L-type lectin-domain containing receptor kinase S.4 432 637 - -
Acco04g2534 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 274 IPR013320 -
Acco04g2534 666 CDD TM_EGFR-like 294 328 - -
Acco04g2534 666 CDD STKc_IRAK 362 622 - -
Acco04g2534 666 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Acco04g2534 666 SMART serkin_6 356 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2534 666 Pfam Protein kinase domain 357 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2534 666 CDD lectin_legume_LecRK_Arcelin_ConA 28 271 IPR001220 GO:0030246
Acco04g2534 666 Gene3D Transferase(Phosphotransferase) domain 1 432 636 - -
Acco04g2534 666 FunFam L-type lectin-domain containing receptor kinase S.4 26 275 - -
Acco04g2534 666 ProSiteProfiles Protein kinase domain profile. 356 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2534 666 FunFam L-type lectin-domain containing receptor kinase S.1 341 431 - -
Acco04g2534 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Acco04g2534 666 MobiDBLite consensus disorder prediction 646 666 - -
Acco04g2534 666 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2534 Acco-ChrAcco04 42192727 42194727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2534 23 627 Receptor kinase-like Gene Family AT1G15530 68.801 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco04g2534 Pkinase 1.3e-50 CL0016