Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2528 ATGGATTCCAAACACTCTCCCAAACTTAAATTCCTCTGTAGCTACAGCGGCAAGATTCTTCCCCGATCCACCGACGGTGTCCTCCGTTACGTCGGCGGGTACACTAGAGTCCTCTCTGTTGATCCTTCCATTTCCTTCTCAGACCTTATGGTAAAGATTGTAGAGTTCTGTGGTTCGTCTGTGACCTTGAAATGTTCATTGCCAAACGGAGACCTCGAGACGTTGATTACCATTGCTAACGACGAGGATTTGGCCATCTGTATTGAGGAATATAAACGTGCTTCGTCTTCAATGGAAAATCCATTGAAGATCCGAGCCGTTCTTTCGCCGCTCAGGTCTCTCAAGAAAGTATCTCCTCCTCTGTCTTCACGGTCGAGCGCCAACCTTTCTTCGACTGTATCGACTCGCTCCTCCACCGAATCGCCGCCGTATTCCCCGGCGTATGGGTATAGGGTTCCCCGTCCGGTCCCGTATCCGATGGGGTTCCGTTACGATTCGAGAAAAGCGTGCCCCTATAACGGTCAATTCTATAAAAGCTCTCGGTTCTTGAATCGTGGGCCTAGCTGCCCCAATTTCTGCAACTGA 585 0.5009 MDSKHSPKLKFLCSYSGKILPRSTDGVLRYVGGYTRVLSVDPSISFSDLMVKIVEFCGSSVTLKCSLPNGDLETLITIANDEDLAICIEEYKRASSSMENPLKIRAVLSPLRSLKKVSPPLSSRSSANLSSTVSTRSSTESPPYSPAYGYRVPRPVPYPMGFRYDSRKACPYNGQFYKSSRFLNRGPSCPNFCN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2528 194 SUPERFAMILY CAD & PB1 domains 25 110 - -
Acco04g2528 194 MobiDBLite consensus disorder prediction 116 146 - -
Acco04g2528 194 Pfam PB1 domain 28 96 IPR000270 GO:0005515
Acco04g2528 194 Gene3D - 29 108 - -
Acco04g2528 194 PANTHER OS05G0427100 PROTEIN-RELATED 6 128 - -
Acco04g2528 194 CDD PB1_UP2 12 108 - -
Acco04g2528 194 MobiDBLite consensus disorder prediction 116 144 - -
Acco04g2528 194 SMART PB1_new 23 109 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2528 Acco-ChrAcco04 42165429 42166121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2528 1 108 MAP Kinase Kinase Kinase AT3G46920 40.367 4.03e-24 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2528 04 42165429 42166121 Acco13g0569 13 4091674 4092965 CCT
Acco04g2528 04 42165429 42166121 Acco04g2528 04 42165429 42166121 ECH