Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2517 ATGCCGCTGGAATCGTCTGAACAAGATGATGCTGATTCTGAGTTCGTGGAGATTGACCCCACTGGTCGATATTGTCGGTACAAGGAGGTTTTGGGGCAAGGTGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTAGCAGATCTATTGCGTAATAATGAAGATTTGGAGCGCCTATATTCAGAGGTGCATTTGCTGAAGACTTTGAAGCACAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGAATGAGAAAATCAACTTCATCACTGAAATTTTCACTTCTGGAACGTTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGTGAGGTTAAAATTGGTGACTTGGGATTGGCTGCGATACTTCAGCAAGCCAATTCAGCTCATAGTGTTATAGGTACTCCGGAGTTTATGGCTCCCGAGCTTTATGAAGAAGAATACAATGAACTTGTTGATGTCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGACAATTGAGTATCCATATGCTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTGGCAAAAGTGAAAGACCCTGGAGTTAAAGCATTTGTAGAAAAGTGTATTGCAAATGTTACCAAGCGGTTGTCTGCAAAGGAACTCTTAATAGATCCCTTTCTTCTACCAGATGATGAAAGTGACAGTGTAGGTGGTTCTTTGAGATCCAGAGCCCTTGATTTAGGACATAGTGACCATCATCTTACTAGTGATCATCCCAAAGAAACTTCTACCGAGTCCGACTGGGAATTCAGAGCAGAAGGTCAAAGGGGAGATGTCAATACTATATTTCTGAAATTGAGAATAGCAGACTCCTCAGGTAAAGTTCGCAAGATCCACTTCCCTTTTGATGTTCGAGAAGACACTGCAATTGATGTCGCTGGTGAAATGGTTCAGGAGTTGGAACTCCCAGACCAAAATGTTACAACTATTGCTGAGGTGATTGACTCAGAAATTCGATGCCTCATTCTAGACTGGAATCCTAATGAAACTCCTACTGCAGATAGTATTGGTCAAGAATATGCAGTTGCAGGTGGCCATGACTCTGGAACTAGGAATAAGGTTTCTCCATGGGAAAATAGTACTACAGCTTCTATTGATGATCTTTCACTAGAACGATTACCTTCAGGTCGTTACTATTGGTCTGACTCACCCAAGGCAGGTAGAAACTCTCAATCAATGCCCGGTGCTTCAAAATTATCATGTCAAGTGGATTCAAATCCTGCAGAAACCTCAGCTGCATGTGGTGCTACTTCGACCAAGGGACAGGATAGCAACTACAGTTGTGATGGTGATAGTAGAGGGGAGAGAAAATATAGTGAGACTGTTGATTCCCAGACCAGTGAGAAAAGTATTACATCTGGGGATTTACAGGCAACCAATGGAGAGTCTCCTTTGGTAGAAAGACCTATGGAATTGAAAGATGATATGTTAGAAGATGTCGACATAATTGCTGCAAAACTCAAGCAATTATTGGTAAAACATCGCGAGGAGGATGATGAACTAAAGAGGAAGCATGGATTAGCTGTCTCAGATTTTCTAAAGGGACTACCTCTAGAAATTCAATATAAGGTCTTGAATATATGTAACCTGGAGGCATCTGACAGGGGCAATGTACCGTAA 1848 0.4091 MPLESSEQDDADSEFVEIDPTGRYCRYKEVLGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNEKINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDVYAFGMCLLELVTIEYPYAECANAAQIYKKVTSGIKPASLAKVKDPGVKAFVEKCIANVTKRLSAKELLIDPFLLPDDESDSVGGSLRSRALDLGHSDHHLTSDHPKETSTESDWEFRAEGQRGDVNTIFLKLRIADSSGKVRKIHFPFDVREDTAIDVAGEMVQELELPDQNVTTIAEVIDSEIRCLILDWNPNETPTADSIGQEYAVAGGHDSGTRNKVSPWENSTTASIDDLSLERLPSGRYYWSDSPKAGRNSQSMPGASKLSCQVDSNPAETSAACGATSTKGQDSNYSCDGDSRGERKYSETVDSQTSEKSITSGDLQATNGESPLVERPMELKDDMLEDVDIIAAKLKQLLVKHREEDDELKRKHGLAVSDFLKGLPLEIQYKVLNICNLEASDRGNVP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2517 615 FunFam Probable serine/threonine-protein kinase WNK1 9 106 - -
Acco04g2517 615 MobiDBLite consensus disorder prediction 457 538 - -
Acco04g2517 615 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Acco04g2517 615 Gene3D - 336 412 - -
Acco04g2517 615 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2517 615 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Acco04g2517 615 MobiDBLite consensus disorder prediction 460 504 - -
Acco04g2517 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Acco04g2517 615 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2517 615 SUPERFAMILY Protein kinase-like (PK-like) 26 315 IPR011009 -
Acco04g2517 615 MobiDBLite consensus disorder prediction 505 519 - -
Acco04g2517 615 CDD STKc_WNK 23 283 - -
Acco04g2517 615 Coils Coil 560 580 - -
Acco04g2517 615 MobiDBLite consensus disorder prediction 520 536 - -
Acco04g2517 615 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 581 - -
Acco04g2517 615 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Acco04g2517 615 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2517 Acco-ChrAcco04 42080838 42084070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2517 13 409 MAP Kinase Kinase Kinase AT3G22420 53.587 1.41e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco04g2517 Pkinase 3.9e-52 CL0016