Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco04g2510 | ATGCAAGCAGGGTTGTTAAGGAACATGCTTTCTCCTGATCCTGCTCGTGTGTCACATGGGTATAGCCGTATAGGGGGAAGGCTTGCCGCCATGGAAGGAAGAACAAGAATGCTTCTCCAATCACTTCTAAAACAATCTCCACTTGAACTAAACCTTACCTTCTTCATTCTATTGTGCTTCATCATCGCCATCTTTGTGCTCAGACGCACATTAACAAGAGGAAACCAACTCAATCTGCCTCCTTCACCACCCAAGTTTCCATTCATAGGAAATCTTCATCAGCTAGGCGCTCTGCCTCACCGTTCTCTCACAGCTCTCTCCCACAAATATGGCCCCCTCATGTTTCTCCGATTGGGTCAAACTCCAACTCTGGTGATTTCTTCTGCAGACATGGCCAGACAGATGACAAAATCCCATGATGTCGTTTTCTCAGATAGGCCTAAAACCACAGCTGCAAAAATATATGTCTATGGATGCATAGATGTGGCTTTCTTACCCTATGGTGAAGAGTGGAGGCTCAAGAGGAAAATCGCTGTTCTTGAGCTTCTCAGTCTGAAAAGGGTTCAATCCTTTCAGTACATCAGAGAGGACGAAGTTGCAGATCTGGTTAACAAGATTCGAGAAGCGTGTCAAGAGAAGAAAAATGGGACTTACGTGAACATGTCTCAGTTGATTATTGCAACTTCAAACAACATAGTAAGCAGATGTCTTCTTGGACAGAAGTTTGACACAGCACATGGTAACTATAGCTTCGGAGACTTAGCAAGGAAAGTGATGGTTCATATGGCAGCTTTCAGTTTTGGAAACTTCTTCCCTTCATTGAGATGGATGGATGTTGTTACTGGATTAATTCCAAGAATCAACGCCACGTTTAGAGAAATAGATGCTTTCTTGGATGAGGTGCTTGTTCAACATAAATCAGCTAGAAGGAATGAAGATGAGGATCACAAGTCAGAAAAGAAAGACTTCATTGATATTCTCCTTCAACTTCAACGAGACGATCAGCTTGACTTCGAGTTCACAAAAGCTGACCTCAAAGCGATGATAATGGATATGTTCGTCGGAGGAAGTGACACAACTTCAACAGCTCTGGAATGGGCTTTTGCAGAGCTAATGAAGAATCCAAGAATAATGAAGAAAGCTCAGGAAGAGGCGAGAAGAGTAGTTGGTAATAAGTCAAAAGTGGAAGAAGATGATGTGAGGCAAATGAAGTATTTGGAATGTGTGGTCAAAGAAACTTTAAGATTACATCCGCCTTTAGCTCTCTCTCTCCCGAGAGAGACAAGGTCAGGTGTGAGTTTGGGAGGGTACTATATTCCTCCACAAACAACCGTGCTTGTGAATTTATGGGGAATTCAGAGAGACCCTGAATTTTGGGAAAAACCAGAAGAGTTTGTTTCAGAGAGATTTGAAAACAACCAAGTTGATTTCAAAGGTCAAGACTTTGAATATATTCCGTTTGGCATTGGAAGGAGGGGATGCCCAGGGATTTCATTTGGGCTTGCATCACTCGAGTATGTGTTAGCTAATCTTCTGTATTGGTTTGATTGGAAGCTTCCTGCTCAAGGCATAGACATGAGTGATTCATACGGACTTTCTGTCAACAAGAAAGTGCCAATTTATGTTCAACCAAAGCCGTATTCAGTAGGATCAAGTTTTGGAAGGACCAGTTAA | 1674 | 0.4247 | MQAGLLRNMLSPDPARVSHGYSRIGGRLAAMEGRTRMLLQSLLKQSPLELNLTFFILLCFIIAIFVLRRTLTRGNQLNLPPSPPKFPFIGNLHQLGALPHRSLTALSHKYGPLMFLRLGQTPTLVISSADMARQMTKSHDVVFSDRPKTTAAKIYVYGCIDVAFLPYGEEWRLKRKIAVLELLSLKRVQSFQYIREDEVADLVNKIREACQEKKNGTYVNMSQLIIATSNNIVSRCLLGQKFDTAHGNYSFGDLARKVMVHMAAFSFGNFFPSLRWMDVVTGLIPRINATFREIDAFLDEVLVQHKSARRNEDEDHKSEKKDFIDILLQLQRDDQLDFEFTKADLKAMIMDMFVGGSDTTSTALEWAFAELMKNPRIMKKAQEEARRVVGNKSKVEEDDVRQMKYLECVVKETLRLHPPLALSLPRETRSGVSLGGYYIPPQTTVLVNLWGIQRDPEFWEKPEEFVSERFENNQVDFKGQDFEYIPFGIGRRGCPGISFGLASLEYVLANLLYWFDWKLPAQGIDMSDSYGLSVNKKVPIYVQPKPYSVGSSFGRTS | 557 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco04g2510 | 557 | CDD | CYP71-like | 109 | 539 | - | - | |
| Acco04g2510 | 557 | Pfam | Cytochrome P450 | 80 | 541 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | P450 superfamily signature | 355 | 372 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | P450 superfamily signature | 485 | 494 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | P450 superfamily signature | 408 | 419 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 448 | 472 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 407 | 425 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 131 | 152 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 228 | 246 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 484 | 494 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 344 | 361 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 494 | 517 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 364 | 390 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | PRINTS | E-class P450 group I signature | 107 | 126 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 487 | 496 | IPR017972 | GO:0005506|GO:0016705 | |
| Acco04g2510 | 557 | Gene3D | Cytochrome P450 | 67 | 550 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Acco04g2510 | 557 | FunFam | Cytochrome P450 83B1 | 66 | 543 | - | - | |
| Acco04g2510 | 557 | Coils | Coil | 378 | 398 | - | - | |
| Acco04g2510 | 557 | PANTHER | CYTOCHROME P450 71B11-RELATED | 62 | 544 | - | - | |
| Acco04g2510 | 557 | SUPERFAMILY | Cytochrome P450 | 80 | 546 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco04g2510 | Acco-ChrAcco04 | 42010110 | 42012825 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco04g2510 | 52 | 541 | Cytochrome P450 | AT3G48270 | 40.845 | 7.16e-140 | 412 |