Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2475 ATGATGGATGGGAGGCGGCATTCAGTCGATGTTCCTATTTCGAAGACTCTTATCGCTTTGAGGAGAGTCAGGTCATTGAGGGATCCATCTACAAATTCTATGAGCAAACTCTGTTCTTCGATTGATAATCTACACTGGGAAAATAGTTCGGGCAATGGGATTTCCCTGCGGTTTTTGGACGCTTCTCGGGCTTGTGATTCTGATGATACTGGTGCATTAAGGTCAAAGAATTTAAGTTGTAGCATGCACAGAGAGCACGATGCTGCTGATTTTGAATTGAACAGTGGCCATTTCAACTCTAAACTGAAGTCTTGTCCTGAAGGGCAGCAGGATGAAGAGCTAGCATACTCTAATTTAAATCAGGAAGGCAATTCCGGAATTAAGTCGACAGGTGATAGCTGCTATAGCAACCATGGACGCAAGGAATTAGATATAGCATCTTTTATGCCCCCTAGCAACGAGGCAACTTCTGGATCGTCAAAGTTAGGGGCAATTGATCATTCTATGTTAACTAGAAAAACGCAATGCAAGAATCAAGTGAAATCATCTGAAGGTATGGGCGATATTGCAGGTCTTAGAGGCAGTCCATGCCTTTCAGTCGGTGAAGCTTTCTCAGCTTATAGTTCTTCGGCTAATATGAATCAAGATGTAGATATTGTAGATGATAATCACCATGGATGTGGAATAAGCTGCTGTTGGTCAAAATCACCAAGGTTTAGAGAATCAAATATATATTCTGATTTAGAAGACCGTCCCCTGATAACCTGGCACGCAGATGAGACAGCTCTTTATGGTCATAAAAACATGAGACACATTGGTGGTGAACTTAGTCCAAATTTTGAAACTCCTAGAAGTTTATGTATGAAATTCAGGCCAAAATCTTTTAATGATTTGGTTGGACAAAATGTGGTAGTGAGGTCTCTTTTGGGTGCCATCTTTAAGGGAAGGGTAACCTCATTCTATCTTTTCCATGGTCCTCGTGGTACTGGCAAGACATCTGCATCTAGGATCTTCGCTGCTGCACTGAATTGTCTTTCCCTTGAGGAGGAAAGGCCATGTGGTCGGTGCAGAGAGTGTGTTTTATTCTTTTCTGGTAGAAGTAAAGATGTTAAAGAAGTTGATTCTGTGAGACTAAATCGTATTGACAAAGTAAAATCCCTTGTAAAGACTGCAAGCATCCCTCCAGGTTCTTCACGTTTTAAGATATTTATTGTTGATGAGTGCCAGTTGATCCTCGGGGAGACATGGGCAAGTCTTTTGAATAGCCTAGAGAGCCTTCCTCATCATGTGGTTTTTATTATGATCACTCCAGACTTGGACAAACTTCCCCGAAGTGCAGTTTCCAGGGCCCAGAGGTATCACTTCCCTAAGATAAAAGATGCTGAAATTGTAAGCAGATTGAAAAAAATTTGCCTTGGAGAAGGTCTTGATTTTGAACAGGATGCTTTGGATTTCATCGCTGCTAAATCCTGTGGTTCACTTAGGGATGCAGAAATCATGCTTGATCAGCTGAGCTTGCTCGGTAAAAAAATCACAATTTCCTTAGCCTATGAGCTCACTGGCATCATTTCTGATGATAAATTGCTTGAATTACTGGATCTGGCTTTGTCCTCCGACACTTCAAATACTGTTAGAAGGGCGCGAGAGTTAATGAGATCAAGGGTGGATCCTCTACAACTTATATCGCAGCTAGCAAATCTCATTATGGACATTCTTGCAGGGAAATGTGATGGTGGTGGTTCTGGAGTCAGAATGAGGTTTTCTAGTAGTCATCAATCTGAAGCAGACCTTCAAAAATTAAATCATGCATTGAGAATACTTTCTGAAACGGAGAAGCAATTACGAATTTCCAAGAACCAATCAACGTGGTTCACAGTAGCTCTTCTACAGTTAAGCTCTGCAGAACATTCTTCTGTCGATGCAAATGGTGCTAAATTAAGAGATGCATGCAATGGAGATGGTGATTTCTGCAGTACATCATCTACAGGGGATAGCGGGAAGCATCTTCCCTCTGCTCAGTATGATAACAAGTTGTTTAGATTAGGACAACTGGATCACACATTAAGTTCCATATGGTATAAAGCCACAGAGTCATGCCAACCTAACAGATTGAAGACTTTTCTTAGGAAACAGGGGAAGTTGTCTTCGCTGGGTGTTAATTGCGGTTTAGCAATTGCTGAGTTGGATTTCCAGCATCGCAGCTATGTACGCAGGGCTGAGAAGTCATGGAAAATGATTGCCAATTCGCTGCAGCTTATATTGGGTTGTAACATAGAGCTCAGGATCAATCATGTACCTTGTACTTCTGATTCTAAATATGCCAAGTTGAAGAGGTCATCTCTCAGTTTTTTTAGTTGTTCCCGTAGAATTCGTCGAAAAGCACTCTTGGATAATGAACAAGGAAGTGAACCAAACACTGATCACACCTCACAAAAAGCTATGATGAGGGATAGAACTGTAACTTGTACATCTGATTGTGGATCTCAGATGCAAAAACCTGAGTCTTGTCATCAAATGGAGGTTGTAACAGCATTGAGAGATGGTGATGGAAATTTGCTGAGCTCAAGGAAGAGTTTGTTGAATAGTTCATGTCAAGAGACTTCAAGGACCTCAAGTTCTGGGGTTGATTCCTCTAAGGAAGAGGGGTTTGATTATGCACACCTAGTTTCATCAAACCCTGATTCAGACTACCAATCAAAATGTTTCCCTCGAAATTTCAGGATTCATAAAAAGAAGTTGCGTTCTCCAGATCTATCTCAGTTGGTTTTTGAGGGCACCCAGCAAGAGAAAGAATTTGTTTTATCTGTCCCAAACTATACCTGTTCTGAGACATATAGCTATGCTAGTGAACCATGTGTTTTCTCCACCAGCTCTAACAATTGTACCAAAGCCGCCCAAAACTAG 2904 0.4136 MMDGRRHSVDVPISKTLIALRRVRSLRDPSTNSMSKLCSSIDNLHWENSSGNGISLRFLDASRACDSDDTGALRSKNLSCSMHREHDAADFELNSGHFNSKLKSCPEGQQDEELAYSNLNQEGNSGIKSTGDSCYSNHGRKELDIASFMPPSNEATSGSSKLGAIDHSMLTRKTQCKNQVKSSEGMGDIAGLRGSPCLSVGEAFSAYSSSANMNQDVDIVDDNHHGCGISCCWSKSPRFRESNIYSDLEDRPLITWHADETALYGHKNMRHIGGELSPNFETPRSLCMKFRPKSFNDLVGQNVVVRSLLGAIFKGRVTSFYLFHGPRGTGKTSASRIFAAALNCLSLEEERPCGRCRECVLFFSGRSKDVKEVDSVRLNRIDKVKSLVKTASIPPGSSRFKIFIVDECQLILGETWASLLNSLESLPHHVVFIMITPDLDKLPRSAVSRAQRYHFPKIKDAEIVSRLKKICLGEGLDFEQDALDFIAAKSCGSLRDAEIMLDQLSLLGKKITISLAYELTGIISDDKLLELLDLALSSDTSNTVRRARELMRSRVDPLQLISQLANLIMDILAGKCDGGGSGVRMRFSSSHQSEADLQKLNHALRILSETEKQLRISKNQSTWFTVALLQLSSAEHSSVDANGAKLRDACNGDGDFCSTSSTGDSGKHLPSAQYDNKLFRLGQLDHTLSSIWYKATESCQPNRLKTFLRKQGKLSSLGVNCGLAIAELDFQHRSYVRRAEKSWKMIANSLQLILGCNIELRINHVPCTSDSKYAKLKRSSLSFFSCSRRIRRKALLDNEQGSEPNTDHTSQKAMMRDRTVTCTSDCGSQMQKPESCHQMEVVTALRDGDGNLLSSRKSLLNSSCQETSRTSSSGVDSSKEEGFDYAHLVSSNPDSDYQSKCFPRNFRIHKKKLRSPDLSQLVFEGTQQEKEFVLSVPNYTCSETYSYASEPCVFSTSSNNCTKAAQN 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2475 967 CDD HLD_clamp_pol_III_gamma_tau 458 521 IPR045085 -
Acco04g2475 967 SMART AAA_5 317 460 IPR003593 GO:0016887
Acco04g2475 967 Gene3D - 459 521 - -
Acco04g2475 967 Gene3D - 279 456 IPR027417 -
Acco04g2475 967 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 286 700 - -
Acco04g2475 967 FunFam DNA polymerase III subunit gamma/tau 459 521 - -
Acco04g2475 967 SUPERFAMILY post-AAA+ oligomerization domain-like 528 631 IPR008921 GO:0003677|GO:0006260
Acco04g2475 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 507 IPR027417 -
Acco04g2475 967 Gene3D - 522 634 - -
Acco04g2475 967 NCBIfam DNA polymerase III subunit gamma/tau 285 631 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Acco04g2475 967 Pfam DNA polymerase III, delta subunit 301 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2475 Acco-ChrAcco04 41538884 41542604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2475 276 570 Core DNA Replication Machinery Family AT1G21690 23.203 6.32e-13 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2475 04 41538884 41542604 Acco04g2475 04 41538884 41542604 ECH