Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2472 ATGTTCAATGTCATATTGATTGGCTCAAAGGAACAGTTTCCTCACCACATATCACATGTTCGAACAGACATAGGTAAAGCAAGAAAAAAAGTGACATTCTTGGAGCTTGCTCGCTTGGATCTTCTTCTCTGTGTATTTGTTTGTTTTGAGAGGAAGGGGAGTTATTTGTGTTGGCCTCGGAAGGACCGATTTGTAAAATCCAATTGCTTCTCCTGTCTTGGCTCGAGATCCGGGCCAAGCACAGAAGAATCGGATTCAGATTTGCATTTGACAATCTTCAACTTCTCACAGGCTTGGATATTTATCTTCCTACGAATGGCTTCAGGCGAGGGGTTTCTGACAGATGAGCAGAGGGAAATGCTAAAAAATGCCAGCAATAATGTGGAAAATTTATCTTCATCTCCGAAATCTCCTACATCCTTTGTTGCTGACCATCAAATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACATTCTGGAAAGTTTGTGCGGGTGAAGAAGGATGGCGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGTGGTGAGGAACCCTATAAGCTGGTGGGGTCTACTGTCACGGACCCCTTGGATGAATTTAAGAAGGCTGTTGTTTCCACCATTGAGGAATATTTCAGCACTGGTGATGTGGATTTAGCTGCATCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATGCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTATATGCTGATGTGATTAGTCCTGCCCAGATTAGGGATGGATTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCAGTGGACATACTAGATGCTGTTGACATCCTTGCTTTGTTTTTGGCTCGGGCTGTTGTTGACGATATCCTTCCTCCAGCCTTTCTTACCAGGGCAAAAAAGGCTCTTCCTGAGTCATCCAAGGGGGTTCAGGCTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCGCATCATGCAGAGCTTGTAGAGAGGCGATGGGGTGGTAGCACACACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAAAGAATATGTTGGCAGTGGTGATACGGTTGAAGCTTGCAGGTGCATTAGGGAGTTGGGGGTTTCATTTTTTCATCATGAGGTTGTAAAGAGGGCTCTGATAGTTGCCATGGAGAACCGTTCAGCAGAATCTTCAATGTTGAAATTATTAAGAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGGTTGGCTGAAGGCATAGATGATCTTGCTCTTGATATTCCATCAGCCAAAACCTTGTTTCAATCATTGGTACCCAGGGCAATATCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATGTCCTGGTTGAGGATGAAAAAGTGAGGAACTACAAAAAGGAGGCAGTAACTATAATCCATGAGTATTTTCTCTCTGATGATATTCCTGAACTGATTCGGAGTCTTGAAGATCTTGGAGCGCCTGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCCATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATTGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTATCATGCTTCTAGAAAGTGCTGAAGATACTGCACTGGATATATTGGACGCGTCAAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGTCCCTCTGAATTTAGAGGAAATTGGCAGCAGGTTGCCACCTAAATGCAGTGGTAGTGAAACTGTACGAATGGCTCGATCACTTATTGGGGCCCGTCATGCTGGTGAGAGGCTTTTGAGATGTTGGGGTGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTATTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTCGGAATGCCTTTCTTCAACCATGAGGTTGTGAAGAAAGCTTTGGTCATGGCCATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGTTTCAGTGAAGGTCTCATCACTATCAATCAGATGAATAAAGGTTTCACCCGCATCAAGGATGGTCTCGACGATCTGGCTCTGGACATTCCAAATGCACGAGAGAAATTTGCCTTCTATGTGGAGTATGCAACCAACAAGGGTTGGCTTCTCCCTTCATTTGATTCCCCAGATGCCTGA 2418 0.44 MFNVILIGSKEQFPHHISHVRTDIGKARKKVTFLELARLDLLLCVFVCFERKGSYLCWPRKDRFVKSNCFSCLGSRSGPSTEESDSDLHLTIFNFSQAWIFIFLRMASGEGFLTDEQREMLKNASNNVENLSSSPKSPTSFVADHQIKAPAGSKAQTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYKLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVDLAASDLRELGSSEYYAYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLTRAKKALPESSKGVQAIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKISDLLKEYVGSGDTVEACRCIRELGVSFFHHEVVKRALIVAMENRSAESSMLKLLREAAEEGLISSSQMVKGFSRLAEGIDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDVLVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFIMLLESAEDTALDILDASNELALFLARAVIDDVLVPLNLEEIGSRLPPKCSGSETVRMARSLIGARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMNKGFTRIKDGLDDLALDIPNAREKFAFYVEYATNKGWLLPSFDSPDA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2472 805 Gene3D - 516 667 - -
Acco04g2472 805 Gene3D - 219 368 - -
Acco04g2472 805 FunFam Programmed cell death protein 4 376 511 - -
Acco04g2472 805 SUPERFAMILY ARM repeat 522 680 IPR016024 -
Acco04g2472 805 ProSiteProfiles MI domain profile. 687 805 IPR003891 -
Acco04g2472 805 SMART ma3_7 227 338 IPR003891 -
Acco04g2472 805 SMART ma3_7 688 797 IPR003891 -
Acco04g2472 805 SMART ma3_7 525 636 IPR003891 -
Acco04g2472 805 SMART ma3_7 391 502 IPR003891 -
Acco04g2472 805 ProSiteProfiles MI domain profile. 390 511 IPR003891 -
Acco04g2472 805 Pfam MA3 domain 689 796 IPR003891 -
Acco04g2472 805 Pfam MA3 domain 526 635 IPR003891 -
Acco04g2472 805 Pfam MA3 domain 391 502 IPR003891 -
Acco04g2472 805 Pfam MA3 domain 227 338 IPR003891 -
Acco04g2472 805 ProSiteProfiles MI domain profile. 226 347 IPR003891 -
Acco04g2472 805 SUPERFAMILY ARM repeat 684 800 IPR016024 -
Acco04g2472 805 SUPERFAMILY ARM repeat 387 508 IPR016024 -
Acco04g2472 805 ProSiteProfiles MI domain profile. 524 645 IPR003891 -
Acco04g2472 805 PANTHER PROGRAMMED CELL DEATH 4 108 801 IPR039778 GO:0045892
Acco04g2472 805 SUPERFAMILY ARM repeat 224 384 IPR016024 -
Acco04g2472 805 FunFam programmed cell death protein 4 218 369 - -
Acco04g2472 805 Coils Coil 114 134 - -
Acco04g2472 805 Gene3D - 377 508 - -
Acco04g2472 805 Gene3D - 675 802 - -
Acco04g2472 805 FunFam programmed cell death protein 4 514 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2472 Acco-ChrAcco04 41508193 41516826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2472 691 787 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.13e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2472 04 41508193 41516826 Acco04g2472 04 41508193 41516826 ECH