Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2441 ATGATTGGCCTTGGTCTTCATTATTCCTCTGTTGGGTATGTTACCTATCCTCATTTGCTTCCAGTTTTTGAAACTAGAGCTTCTCTTTCTTCTTCTCCTTCTTGGACCCTTCATTTTTCTGATGAAACCAAAGGAAATAACAATAATGATAAGAGGTTGAAGAGACCTGCAAGTATCCCAGAAGTGCTTGGAGATTATAGAAGCCTTTCTTCAAACAGTGGAAGTGAAAATTTCTATGGCAGTCTCAGCAGAAGCAATAGTGTGAATAGTCTTCCAAAGCTCCATTTCAAAGAACACATATGGACTATTACACAGAGATGTCTTGCTTCTGAAGAGGCTGCACAGAGAGATGAAACCAATTCTGAGGTACGTGAAGCTGAAGAACATGAAGACGGGTATTGTGCAGATGGGATGAGACTCGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCGCATTCTTCGATTTTGCTATCTGAACTGAGATCAAACGCATTGGTTTTTGGCTCTCCATTTCAGCGAGTGGCTTCTTGTTTTGCACAAGGGCTATCTGATCGGTTCGCGATGGTTCAACCGGTTGGGGCTGTGGGGAAAACGGATTCAATGATGAATATTATGGACATAGCCTCGGAAGAAATGGAAGAAGCATTTAAGTTGGTTTATGAGATTTGTCCACACATTAAGTTTGGTCACTTTGTAGCTAATGTCACAATATTGGAAACCTTTGAAAACCACAGTTTCTTTTCATGTGGTGGACCTTGGGATGACTATTGGTCTTCCCGACGACCACCAGTGGAGGGGACTGATTCAGAGCCTGGCTAA 837 0.4229 MIGLGLHYSSVGYVTYPHLLPVFETRASLSSSPSWTLHFSDETKGNNNNDKRLKRPASIPEVLGDYRSLSSNSGSENFYGSLSRSNSVNSLPKLHFKEHIWTITQRCLASEEAAQRDETNSEVREAEEHEDGYCADGMRLVQLLVHCAEGVACRDKSHSSILLSELRSNALVFGSPFQRVASCFAQGLSDRFAMVQPVGAVGKTDSMMNIMDIASEEMEEAFKLVYEICPHIKFGHFVANVTILETFENHSFFSCGGPWDDYWSSRRPPVEGTDSEPG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2441 278 Pfam GRAS domain family 140 250 IPR005202 -
Acco04g2441 278 Coils Coil 109 129 - -
Acco04g2441 278 ProSiteProfiles GRAS family profile. 131 278 IPR005202 -
Acco04g2441 278 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 104 250 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2441 Acco-ChrAcco04 41134019 41134855 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2441 140 249 GRAS Transcription Factor Family AT2G37650 33.628 1.26e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco04g2441 GRAS 5.5e-18 CL0063