Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2439 ATGATTCCTCTTTATAGAGGCCTCAAACGCGACTTAAGTGAAGATGATGATCACTGTCCTATGATAGGCCTTGGTTTTCATAATTCCTCTGTTGGGTATGTTACCTATCCTCATTTGCTTCCAGTTTTTGAAACTAGAGCTTCTCTTTCTTCTTCTCCTTCTTGGACCCTTCATTTTTCTGATGAAACCAAAGGAAATAACAATAATGATAAGAGGTTGAAGAGACCTGCAAGTATCCCAGAAGTGCTTGGAGATTATAGAAGCCTTTCTTCAAACAGTGGAAGTGAAAATTTCTATGGCAGTCTCAGCAGAAGCAATAGTGTGAATAGTCTTCCAAAGCTCCATTTCAGAGATCACATATGGACTATTATACAGAGATATCTTGCTTCTGAAGAGGCTGCACAGAGAGATGAAACCAATTCTGAGGTACGTGAAGCTGAAGAACATGAAGACGGGTATTGCGCAGATGGGATGAGACTCGTTCAGCTTCTTGTTCTTTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCGCATTCTTCGATTTTACTATCTGAACTGAGATCAAACGCATTGGTTTTTGGCTCTCCATTTCAGCGAGTGGCTTCTTGTTTTGCGCAGGGTCTATCTGATCGGCTCGCGATGGTTCAACCGGTCGGGGCTATGGGCAATGTGGAACCAATGATGAATATTATGGACAAAGCCTCAGAAGAAATGGAAGAAGCATTTAAGTTGGTTTATGAGATTTGCCCACACATTAAGTTTGGTCACTTTTTAGCTAATGTCACAATATTGGAAGCCTTTGAAAACCACAGTTTTGTTCACGTGGTGGACCTTGGGATGACTCTTGGTCTTCCCCACGGCCACCAGTGGAGGGGACTGATTCAGAGCCTGGCTAATCGCCCCGGCCAGCCGATTCGCCGCCTTAGAATTACAGGGGTTGGCCTTTGTGTTGAGAAACTTAAGTTGATTGGTAAAGAACTTGAACTTTATGCTCATAACTTGGGGATTAACCTGGAGTTCTCAGTGGTGGGAAAGAACTTAGAAAATTTGCATACTGATGACATAAAGGTGAATGAAGATGAGGTTTTGGTGGTTAATAGCATTCTTCAATTGCACTGTGTGGTAAAAGAGAGTCGTGGGGCCTTAAACTCAGTCCTTCAGACAATTCATAAACTCTCACCAAAAGTTTTGGTTATGGTTGAGCAGGATTCAAACCATAATGGACCCTTTTTCCTTGGGAGGTTCATGGATGCACTTCATTATTACTCTGCCATTTTTGACTCTTTGGATGCTATGTTACCAAAGTATGACACTAAGAGAGCAAAAATTGAACAGTTCTATTTTGCAGAGGAGATAAAGAACGTTGTGAGCCGAGAGGGACCAGAGAGGGTTGAGAGGCACGAGAGGGCGGACCAGTGGCGCCGGAGGATGAGTAGGGCCGGGTTTCAGGGTGCACCGATGAAGATGGTGACTCAAGCCAAGCAGTGGCTTCAGAAGAATGAGGTTTGTGATGGCTATACTGTTGTTGAGGAGAAAGGTTGTTTGGTCCTTGGGTGGCAATCAAAGCCTATTGTGGCAACTTCTTGCTGGAAATGCTGA 1599 0.4378 MIPLYRGLKRDLSEDDDHCPMIGLGFHNSSVGYVTYPHLLPVFETRASLSSSPSWTLHFSDETKGNNNNDKRLKRPASIPEVLGDYRSLSSNSGSENFYGSLSRSNSVNSLPKLHFRDHIWTIIQRYLASEEAAQRDETNSEVREAEEHEDGYCADGMRLVQLLVLCAEGVACRDKSHSSILLSELRSNALVFGSPFQRVASCFAQGLSDRLAMVQPVGAMGNVEPMMNIMDKASEEMEEAFKLVYEICPHIKFGHFLANVTILEAFENHSFVHVVDLGMTLGLPHGHQWRGLIQSLANRPGQPIRRLRITGVGLCVEKLKLIGKELELYAHNLGINLEFSVVGKNLENLHTDDIKVNEDEVLVVNSILQLHCVVKESRGALNSVLQTIHKLSPKVLVMVEQDSNHNGPFFLGRFMDALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNVVSREGPERVERHERADQWRRRMSRAGFQGAPMKMVTQAKQWLQKNEVCDGYTVVEEKGCLVLGWQSKPIVATSCWKC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2439 532 Pfam GRAS domain family 160 531 IPR005202 -
Acco04g2439 532 Coils Coil 129 149 - -
Acco04g2439 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 526 IPR005202 -
Acco04g2439 532 ProSiteProfiles GRAS family profile. 151 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2439 Acco-ChrAcco04 41124415 41126013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2439 157 531 GRAS Transcription Factor Family AT3G03450 37.371 1.69e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco04g2439 GRAS 5e-110 CL0063