Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2433 ATGGCGGTGCATCGATCTTGCAGCCGCCGCCATGTCACATTTAAGAACGGTCGTAGATCCTCAGATTTTGAGGATTCAGATCCTAGACGGATTGAGTATTATGGTGAAGTTGTGGACGGTGAAAACGCTCATGAACCACCAGAGAAGAGAAGAAAAATTTCTCCAATTGTTTGGGACCTAGCAGAAAAGGAGATAATATCTTCAAAGAACGGGACCGCACAGGTTACTTCGTTGTCTCCCTTTTGTCCATCACAACAAAGCTCTCATGGAGCTAGTGGTGTTTCTTCTGGTGGAGCCGTTAATACTGAGTCTCCAGCTGATTTCTCTAGTATATTACTTCAAGGAAATTCCAGCAATGAGGTTGAATACGTTGCTCAGTCTGATAAGGAACATGTGCAAGGTTGGAATATCAAGATGTCAAGATGGTTGTCAGATGATTACTCGCCAAGGAATACATCTGATGATGATGACATGCATGAAAAAGAGACATCGAGCCCAGAAAGTGGTGAATTCATATGTGAAAGTTCAGATGTCAAAAAATCTAGATCATCAAGAAATAGTGCAGGAGTTGATTGTTTCTGCCCTTCAAGTAAAGAAGAGTTTGATTCTGAGGAGAAGTTACTTGATGAAGTTGAGGAACATAGCGGATCTTCTGATTTTAGTCACCCTTCATCAAATCCTGAAGATGGGGGCTTAGTAGCAATGCAGAGAAACACAAACAGCATCCAGAGTTGCAGAAGTGTTTCAGAATTTGAAATGATCAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAAGGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTGAAGATGAATATGGAAAGAGATGGCTTTCCAATGTCCTCTTTGAGGGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTGGTTGTAGATGATTTTGATGGTGTTTTCATGGTAATGGAATATATGGAGTGTGACCTTAAAGGCCTGATACGGATGATGAAGCGGCCCTTTGGTATGGGTGAAATAAAATCCTTGATGATGAAACTTCTCAAGGGTGTCAAGTATCTCCATGACAATTGGGTTCTTCACCGAGATTTGAAGACATCTAATATTCTCTTGAATAAAGAGGGTGAGCTGAAAATATGTGACTTCGGTTTATCCCGTCACTATGGAAGCCCACTCAAGCCGTATACTCCTCTTGTGGTTACTTTGTGGTATAGGGCTCCTGAGCTTCTTCTAGGTGCTAAAGAGTACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATTATGGCTGAATTAGTTGCTAAGTCACCTCTATTCCAGGGAAAATCTGAAATTGAGCAGCTTAATAACATTTTCCAAACCCTGGGCACACCTAATGAGAAAATTTGGCCTGGAGTATCCAAATTGTCTGGATTTAAGGGCAACTTTGTTAAGCATCCGCACAATCTATTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCGCCTATTCTTTCTGAATTAGGATTTGACTTGTTGAGCAAGCTTCTAACTTATGACCCCGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCATGAAGCCCCTCTTCCTAATTCTGACTTCAATATCAGATTACCTACACAGCGCTGCTAG 1683 0.4076 MAVHRSCSRRHVTFKNGRRSSDFEDSDPRRIEYYGEVVDGENAHEPPEKRRKISPIVWDLAEKEIISSKNGTAQVTSLSPFCPSQQSSHGASGVSSGGAVNTESPADFSSILLQGNSSNEVEYVAQSDKEHVQGWNIKMSRWLSDDYSPRNTSDDDDMHEKETSSPESGEFICESSDVKKSRSSRNSAGVDCFCPSSKEEFDSEEKLLDEVEEHSGSSDFSHPSSNPEDGGLVAMQRNTNSIQSCRSVSEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMERDGFPMSSLREINILSSFNHPSIVEVKEVVVDDFDGVFMVMEYMECDLKGLIRMMKRPFGMGEIKSLMMKLLKGVKYLHDNWVLHRDLKTSNILLNKEGELKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKGNFVKHPHNLLRKKFPVASFIGSPILSELGFDLLSKLLTYDPEKRISAEAALLHDWFHEAPLPNSDFNIRLPTQRC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2433 560 PANTHER CELL DIVISION PROTEIN KINASE 249 547 - -
Acco04g2433 560 SMART serkin_6 251 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2433 560 MobiDBLite consensus disorder prediction 144 189 - -
Acco04g2433 560 SUPERFAMILY Protein kinase-like (PK-like) 245 547 IPR011009 -
Acco04g2433 560 MobiDBLite consensus disorder prediction 203 217 - -
Acco04g2433 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Acco04g2433 560 CDD STKc_CDC2L1 245 541 IPR045267 GO:0004674|GO:0005524|GO:0006468
Acco04g2433 560 Pfam Protein kinase domain 251 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2433 560 MobiDBLite consensus disorder prediction 71 104 - -
Acco04g2433 560 MobiDBLite consensus disorder prediction 148 181 - -
Acco04g2433 560 Gene3D Phosphorylase Kinase; domain 1 233 332 - -
Acco04g2433 560 Gene3D Transferase(Phosphotransferase) domain 1 333 552 - -
Acco04g2433 560 ProSiteProfiles Protein kinase domain profile. 251 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2433 560 FunFam Cyclin-dependent kinase G-2 333 559 - -
Acco04g2433 560 FunFam cyclin-dependent kinase G-2 isoform X1 236 332 - -
Acco04g2433 560 MobiDBLite consensus disorder prediction 203 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2433 Acco-ChrAcco04 41061188 41063298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2433 242 547 Core Cell Cycle Gene Families AT5G10270 47.205 5.62e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Acco04g2433 Pkinase 2.9e-73 CL0016