Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2429 ATGCATATATTCCCACCACAGCTTCTATTTCTGACTGCTCTGCTTCTTGAAACAGAAAAACTTTTCATGGGGTTTCATAACTTGGTTCTGCTACTCTGTTTTGCTTCTTGGTGCTTTTGTTCTGCTTCTCAGTTACAATCATCTCAAACCCAAGTGCTTCTTCAGCTAAAGAAGCACTTGGAGCACCCAAAACAACTAGATATATGGAAGGATCGTTTGGCTCCTTTTTGTTCTTCTCCTTCTTCACAAGTAAATGTCACATGCCAAGGGAATTTCGTCACTGAGCTAAGCATAGTGGGCGAAGCTAACCCGTCAAAGGTTAGAGATTTTGATGGTTTTCCTGTTCAGAGTCGGACATTGTCAAGGAACTTCTCTATGGATTCTTTTGTGGCTACTCTTGCCAGGTTAACTAGCTTGAAAGTTCTTCGTCTTGTTTCTTTGGGCTTGTGGGGTCCACTTCCTAATAAAATCCAGAGGCTTTATGAGCTTGAATATTTGGACTTAAGTTCAAACTTTCTCTGTGGGTCAATCCCTTCAAAGATTTCTGCCATTGTGAACCTTCAAGTTCTTGCACTTGATGACAACTTCTTCAACAGTACAATTCCCATGTTGTTCAATTCTTTGACTAATTTGACAGTTCTTGGCTTAAGCAATAACAGATTGAAGGGTCAGTTAGGAGATTTTAGTGCTTTGAATGCCTTACAAGTGCTGGATTTGGGAGACAATAGATTAGACTCTACGCTACCAAAAATGCCAAAAGGGTTAATAAGGCTTTTTCTGAGCAAGAACTTGTTCTCTGGTGAAATTCCCAAGCAGTATGGTCAGCTAAATAGGCTTCAACAGCTAGACATTTCATTCAATACACTCACAGGATCGCCTCCTCCTGAGATTTTCTCTTTGCCCAAAATCACTTTCTTGAATTTGGCATCAAACATGTTAAGTGGTTCTCTTTACAACAACTTAAAATGTAGCAGTAAACTCAGATTTGTTGATATCTCACACAACAAATTAATGGGTTTCTTGCCTTCTTGTCTGGGAACAGAGTCACAAAACAGGGTTGTTAAGCTTGAAGGAAATTGCTTATCCTCTAAGTTTCAGCATCAGCATGCAGTATCATACTGCTCAGAGGTTCATGTGAAGAAGAATAACACTTCCAGAGTTGGAATTTTAGTTGGTATAATTGTTGGAGCTTTTTTAGTAATTGTGGTCCTGGCTTTGGGAATTGTTGTGTGTGGACGGTTTTGCCCTAGAGGGATCTCAGAGCAGCATCTATTGAATAAAACAGTTCAAGATAGCTCTAAAGCTTCAGTTGGGCTCTCCACTGAGATTCTGGCTAATCCAGGATTTATTTCTCAAGCTTCCAAGTTAGTCAAAGAAGATCTGCCTATGTGTCGGCCCTATTCTTTTGAAGAGCTTAAGCAAGCTACAAATAATTTTCACGACTCTACCTTCATGGGTGGAAATTTATATGGGAAGCTTTACAGAGGAAAGCTAGAAAATGGGAAGCAAGTTGCAATAAGGAGCTTGCCACTGTCAAAAAAGTATTCGTTCAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAGGCTTCGTCATCCTCATCTGGTATCTCTTTTGGGTCACTGCATTGATGGTGCAGTAGCAGAAAATAATGGCACAAACGTATTTCTCATATATGAATATGTTCACAATGGAAGTTTCCAGAGTTACTTATCTGGAACTAGTTCCGGCAAGGTTTTCAGTTGGTCCGAGAGATTGGCGGTTTTGGTTAGCATTGCCAAGGCAGTTCACTTTCTGCACACAGGAATGATACCCGGTTTCTTTAAGAACCGGCTCAAAATGAACAATATATTGCTTAGCGAGAATTGGACGGCAAAATTGAGTGACTATGGACTGTCCATTATCTCAGAGGAAGCTGACGTAAGTGAGGGAAAAGGAGAAATTGCTGGATCATGGGAAATGGTAAGATTAGAAGATGATATTTATAGCTTTGGATTTATACTACTTGAGGCACTTCTTGGACCTTCAGTATCTGCTAAAAAAGAAGCGATTTTGCCGACTGTTACGGTCTGCTCAGAATAA 2082 0.4015 MHIFPPQLLFLTALLLETEKLFMGFHNLVLLLCFASWCFCSASQLQSSQTQVLLQLKKHLEHPKQLDIWKDRLAPFCSSPSSQVNVTCQGNFVTELSIVGEANPSKVRDFDGFPVQSRTLSRNFSMDSFVATLARLTSLKVLRLVSLGLWGPLPNKIQRLYELEYLDLSSNFLCGSIPSKISAIVNLQVLALDDNFFNSTIPMLFNSLTNLTVLGLSNNRLKGQLGDFSALNALQVLDLGDNRLDSTLPKMPKGLIRLFLSKNLFSGEIPKQYGQLNRLQQLDISFNTLTGSPPPEIFSLPKITFLNLASNMLSGSLYNNLKCSSKLRFVDISHNKLMGFLPSCLGTESQNRVVKLEGNCLSSKFQHQHAVSYCSEVHVKKNNTSRVGILVGIIVGAFLVIVVLALGIVVCGRFCPRGISEQHLLNKTVQDSSKASVGLSTEILANPGFISQASKLVKEDLPMCRPYSFEELKQATNNFHDSTFMGGNLYGKLYRGKLENGKQVAIRSLPLSKKYSFRNFKLRLDLLARLRHPHLVSLLGHCIDGAVAENNGTNVFLIYEYVHNGSFQSYLSGTSSGKVFSWSERLAVLVSIAKAVHFLHTGMIPGFFKNRLKMNNILLSENWTAKLSDYGLSIISEEADVSEGKGEIAGSWEMVRLEDDIYSFGFILLEALLGPSVSAKKEAILPTVTVCSE 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2429 693 Gene3D Transferase(Phosphotransferase) domain 1 562 685 - -
Acco04g2429 693 Gene3D Phosphorylase Kinase; domain 1 450 561 - -
Acco04g2429 693 ProSiteProfiles Leucine-rich repeat profile. 210 232 IPR001611 GO:0005515
Acco04g2429 693 Pfam Leucine rich repeat 186 244 IPR001611 GO:0005515
Acco04g2429 693 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 255 379 - -
Acco04g2429 693 Gene3D Ribonuclease Inhibitor 46 254 IPR032675 -
Acco04g2429 693 Gene3D Ribonuclease Inhibitor 255 390 IPR032675 -
Acco04g2429 693 SUPERFAMILY Protein kinase-like (PK-like) 461 675 IPR011009 -
Acco04g2429 693 SMART LRR_typ_2 276 300 IPR003591 -
Acco04g2429 693 SMART LRR_typ_2 208 230 IPR003591 -
Acco04g2429 693 SMART LRR_typ_2 160 184 IPR003591 -
Acco04g2429 693 SMART LRR_typ_2 231 254 IPR003591 -
Acco04g2429 693 Pfam Leucine Rich Repeat 163 179 IPR001611 GO:0005515
Acco04g2429 693 SUPERFAMILY L domain-like 133 380 - -
Acco04g2429 693 FunFam Leucine-rich repeat receptor protein kinase EMS1 129 228 - -
Acco04g2429 693 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 326 675 - -
Acco04g2429 693 Pfam Protein tyrosine and serine/threonine kinase 486 672 IPR001245 GO:0004672|GO:0006468
Acco04g2429 693 ProSiteProfiles Protein kinase domain profile. 479 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2429 Acco-ChrAcco04 41033525 41037046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2429 29 685 Miscellaneous Gene Families AT5G14210 49.135 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Acco04g2429 PK_Tyr_Ser-Thr 2.2e-18 CL0016