Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2426 ATGGCTAGCAGTAGTTCTCTTTCACTTTGTCCATACAGCTTTTATCGTCACCTGAACCCAAAAAGGCGACCCATTTTGTGCTCGTTTGGCTCTTCTTCGGTCGTAGGTGTTGATGGATCTAAAGTACCACGCAAAAGAACGAGAAAAATTGAAGGTCCTGGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCCCTGCGAGTTCTTCCTATTGGTGGGTTGGGTGAAATAGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACTATGATGAGCTTGGAGTCCAAAAGATTATACCTGATACGACATTTATAAGAAAATGGAAGCATAAAATTGAAGCAGTTGTTATAACGCACGGCCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATACCAGCATTGGATGCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGAAAACGTTTGAAGGAGCATGCTATTTTTGTTCCATCAAGACTCAAATTATTTCGAACAAGGAAGAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGAAGTTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGAACAATGAGTGAATCTACGGTGGCAGATGCACTGTTAAGGCATATTTCTGCTGCTAAAGGGAGGGTTATTACAACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGCATGTCTTTAAGGACATATCTAGATGCAGCTTGGAAGGACGGAAAGGCACCATTTGATCCGTCTTCCCTGGTGAAAGTGGAGGACATTGATGCTTATGCTCCTAAGGATTTGCTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCATTTGGTGGTAGTCATTCTTTCAAACTGACCAAGGAAGACATAATTTTGTATTCGGCTAAGGTTATCCCTGGTAATGAGTCTCGCGTGATGAAAATGATGAATCGCATATCAGAGATTGGATCATCAATAATAATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCGTATCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAACCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTGCTTGGAAAGTCAACTGGCATTCAACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACACTTAAGAAACAGAAGAGTCCTTTCCAATGGTTTTGTTTCCCTTGGAAAAGAGAATCTACAGTTGAAATACAGTGATGGGGACAAAGCATTTGGTACATCAAGCGAACTTTTCATTGATGAAAGATTGAGAATTGCTTTAGATGGAATTATTGTGGTCAGCATGGAAATATTTCGCCCTCAAAATAATGAGAATCATGTTGAAAACACCTTAAAAGGAAAGATAAGGATTACCACAAGATGCCTATGGCTTGACAAAGGAAAGCTGTTGGATGCGCTTCATAAAGCTGCTCATGCTGCACTGTCAAGCTGCCCGGTAAACTGTCCATTGTCTCACATGGAAAGAACTGTATCTGAGGTATTGAGGAAGTTGGTAAGGAAGTATAGTGGCAAAAGGCCAGAAGTTATTGCTGTTGCTATAGAAAACCCTGCCGCTGTTCTTGCTGACAAGATAAAAGCAAGGCTGTCAGGAAAATCTCATATGGGCCTTGAGATGCCATCATTGAGAAAAGCTGTGGATGGGCGTAAAGAGGAAAAGAAGTCCAGTAAAATACCAATAAAAGGAGATGATGGCGTTGATGTTGAAGGACTCCTACCTGAGGATGATATTCCTACTCCAAGTGGAGCCGAGGGTGATTCCACTGATTCAGAGGATTCAGATGATTTTTGGAAATCGTTCGTCACACCTTCAACCACGGAAAAGTCAATCAAAGCTACCAATGGTTATATTCCACGAAAGCAGCAAGAGTCCCAGCCGATGAAAGATGATTCTGAAGATTCTGAAGAAGGCAAGTCTGAAGCCAAGCCTTCAAAAACAGCGAAGAGAAATAAATGGAAACCTGAGGAAGTGAAGAAGCTGATTGACATGCGTGGGGAGCTGAACGAGAGGTTTCAAGTTGTGAAGGGAAGAATGGTCCTCTGGGAGGAGATATCTCAAAAGTTTTTGGCTGATGGTATCAAAAGAAGTCCAGGGCAATGTAAATCTCTGTGGACTTCTATGATACAAAAATATGAGGAGATCAAGAATGGCAAGAGCAGCAAGAAAAGCTGGTCATATTGGGAGGACATGGACAGGATAATGTCGGATAACGAGGCACTAGCAGCAAAATGA 2592 0.4198 MASSSSLSLCPYSFYRHLNPKRRPILCSFGSSSVVGVDGSKVPRKRTRKIEGPGKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWKHKIEAVVITHGHEDHIGALPWVIPALDAHTPIFASSFTMELIRKRLKEHAIFVPSRLKLFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREVLEELSKEGVTLMMSDSTNILSPGRTMSESTVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSSLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASFGGSHSFKLTKEDIILYSAKVIPGNESRVMKMMNRISEIGSSIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIQHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEIFRPQNNENHVENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLSHMERTVSEVLRKLVRKYSGKRPEVIAVAIENPAAVLADKIKARLSGKSHMGLEMPSLRKAVDGRKEEKKSSKIPIKGDDGVDVEGLLPEDDIPTPSGAEGDSTDSEDSDDFWKSFVTPSTTEKSIKATNGYIPRKQQESQPMKDDSEDSEEGKSEAKPSKTAKRNKWKPEEVKKLIDMRGELNERFQVVKGRMVLWEEISQKFLADGIKRSPGQCKSLWTSMIQKYEEIKNGKSSKKSWSYWEDMDRIMSDNEALAAK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2426 863 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Acco04g2426 863 MobiDBLite consensus disorder prediction 656 773 - -
Acco04g2426 863 MobiDBLite consensus disorder prediction 743 773 - -
Acco04g2426 863 Gene3D - 278 428 IPR042173 -
Acco04g2426 863 Pfam Myb/SANT-like DNA-binding domain 769 853 IPR044822 -
Acco04g2426 863 PANTHER RIBONUCLEASE J 1 863 - -
Acco04g2426 863 SMART sant 768 830 IPR001005 -
Acco04g2426 863 Gene3D - 529 635 - -
Acco04g2426 863 CDD GT1 770 835 - -
Acco04g2426 863 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Acco04g2426 863 Gene3D - 81 493 IPR036866 -
Acco04g2426 863 SMART Lactamase_B_5a 89 286 IPR001279 -
Acco04g2426 863 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 470 IPR011108 -
Acco04g2426 863 Pfam Beta-lactamase superfamily domain 100 296 IPR001279 -
Acco04g2426 863 Gene3D - 772 833 - -
Acco04g2426 863 MobiDBLite consensus disorder prediction 717 741 - -
Acco04g2426 863 MobiDBLite consensus disorder prediction 663 688 - -
Acco04g2426 863 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2426 Acco-ChrAcco04 40995289 41004482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2426 771 855 Trihelix Transcription Factor Family AT2G38250 33.333 6.25e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco04g2426 Lactamase_B_2 5.8e-11 CL0381