Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2419 ATGGACCTCCCGATAGAGTCTACCTCCGCCCCACATTTCTCTGGTCGGCGTCCTTCAACGACGACGTTGTCTTCGTCGTTGTTATCTCCGAATGATGACAGTCTCGTTGGCCCTACGCAGCCATTTGTGATCGGGGTCTCTGGAGGTACGGCATCAGGCAAGACCTCTGTGTGTGATATGATCATTCAACAATTGCAAGATCATAGAGTGGTGTTAGTCTATCAGGACTCATTCTACCGTGGTTTAACAGAAGAAGAATTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATATAGAGGAACTTGTAGAGTGTATCAGCAAGCTCAAATCTGGACACTCTGTTCATGTACCGGTATATGATTTTAAGACACATCAGCGGTTGTCTGAAAAATATATGCAGGTCAATGCATCTGAGGTAATCATTGTGGAGGGCATACTGGTTTTTCATGAGCAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACCGTTGACAGAGGTAGAGATGTACAGTCGGTCCTGGAACAGTATTCAAAATTTGTTAAGCCTGCCTTTGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATGTGGTAGCAGTAGACTTGATCGTTCAACATATCCGCAGTAAGCTTGGCCAACATAACCTCTGCAAATTATATCCAAATGTGAATGTTATCCAATCTACTTATCAGATTAGGGGCATGCACACTCTAATTCGTGACAAGAATGTATCAAAACACGATTTTGTTTTTTATTCAGATCGGCTAATTCGTTTGGTAGTGGAACATGGCCTAGGCCATCTGCCATTTACCGAAAAGCAAGTTATTACACCTACAGGATCAATTTACACTGGAGTTGATTTCTGTAAGAAATTGTGCGGCGTATCCGTCATTCGAAGTGGCGAAAGCATGGAGAATGCTTTGCGCGCATGTTGTAAAGGAATTAAAATAGGAAAAGTTCTCATCCACCATGAAGGTGATGAGATCCAGGTACTGGTTCCTACGTCAGCTTCTGTTGTTGTGGTTATGTATTTCTCTGGAACTGGTTCACTTACAATGCTTGCTCTGCCCCTTCTCTTTCTTCTTCTACATAAGCTTATTTATGGGAAGCTTCCAAAAGATATTTCAGAGAGGCATGTTCTCCTTGTGGACCCAGTGCTTGGTACAGGTAACTCAGCCAGCCAAGCCATTGAGCATCTCATACGAAATGGAGTTCCAGAGTCCCACATAATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACACCGTGTATGCAAACGTTTTCCATACCTGAAAATAGTCACTTCGGAGATTGAAGTTGGACTGAATCAAGAGTTTCAAGTCATACCAGGGTTGGGAGAATTTGGGGACCGCTATTTCGGTACTGACCAGTAA 1491 0.4299 MDLPIESTSAPHFSGRRPSTTTLSSSLLSPNDDSLVGPTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVYQDSFYRGLTEEELKRVHEYNFDHPDAFDIEELVECISKLKSGHSVHVPVYDFKTHQRLSEKYMQVNASEVIIVEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDVQSVLEQYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRSKLGQHNLCKLYPNVNVIQSTYQIRGMHTLIRDKNVSKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKVLIHHEGDEIQVLVPTSASVVVVMYFSGTGSLTMLALPLLFLLLHKLIYGKLPKDISERHVLLVDPVLGTGNSASQAIEHLIRNGVPESHIIFLNLISAPEGIHRVCKRFPYLKIVTSEIEVGLNQEFQVIPGLGEFGDRYFGTDQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2419 496 CDD PRTases_typeI 398 467 IPR000836 -
Acco04g2419 496 Gene3D - 38 244 IPR027417 -
Acco04g2419 496 FunFam Uridine kinase 38 244 - -
Acco04g2419 496 NCBIfam uridine kinase 42 242 IPR000764 -
Acco04g2419 496 MobiDBLite consensus disorder prediction 1 32 - -
Acco04g2419 496 MobiDBLite consensus disorder prediction 12 32 - -
Acco04g2419 496 Gene3D - 245 494 IPR029057 -
Acco04g2419 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 234 IPR027417 -
Acco04g2419 496 SUPERFAMILY PRTase-like 244 495 IPR029057 -
Acco04g2419 496 PRINTS Uridine kinase signature 209 222 - -
Acco04g2419 496 PRINTS Uridine kinase signature 116 131 - -
Acco04g2419 496 PRINTS Uridine kinase signature 187 198 - -
Acco04g2419 496 PRINTS Uridine kinase signature 41 58 - -
Acco04g2419 496 PRINTS Uridine kinase signature 71 82 - -
Acco04g2419 496 PRINTS Uridine kinase signature 173 183 - -
Acco04g2419 496 CDD UMPK 43 241 IPR000764 -
Acco04g2419 496 PANTHER URIDINE KINASE 38 356 - -
Acco04g2419 496 Pfam Uracil phosphoribosyltransferase 259 494 - -
Acco04g2419 496 Pfam Phosphoribulokinase / Uridine kinase family 43 229 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2419 Acco-ChrAcco04 40903293 40907982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2419 1 496 PRT Gene Family AT5G40870 70.784 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2419 04 40903293 40907982 Acco04g2419 04 40903293 40907982 ECH