Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2417 ATGGTTTCAACGAGACGAAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAATCCTCCCTCACCGAAGCGTCAGAAGGCTGAAAATGGTGGTCCGTCGGAGAAACCGAAGCCGGCAGCGGAGAATTCTAAAGAAGGAAGCACCCCTGAGCCGGCGGCTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGGTGATGGTCTGACTTCTGGCAAGGGTGATGCTACGGCGGCTGTCGCGGTGGCGCTGCCGATCGGTGATGGGTCTTCGCCGACTTTGGTGGTTGACAAGCCAAGGGGTTCTTTGTCGTCTTGGAACATTTATCAGAAGCAAAGTCCAAGTTCTGAGACCTCGGCGCCTTGGTGTAGGCTCCTGTCGCAGTCTGCCCTGAACCCAAATGTTTCCATTTGCCCACCCAACTTCACTATTGGTTCCAGTAGAAATTGCAACTTCCCCCTGAAGGATCAGACTATTAGTGGAAATCTGTGCAAGATTAAGCATACACAGCGTGAGGGCTGTGCTGTAGCCTTGCTAGAGAGTACGGGTAGCAAAGGATCCGTGCTAGTTAATGGGGCACTTGTCAAGAAGAACACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATCTTCCAGCAGCTAAATGCTGACGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATTTCTGCAGCTTGAAAGGAGAACAGGAGACCCCTCAGCTGTGGCCGGGGCTTCCATTTTGGCTTCTCTTTCAAACTTCAGACAAGAAATCCCGAGATGGAAATCTGTGTCTCAGAATACAAATAAAGCTCATCAGGGCACTGATGTCTCTGCTCATTCAGCTCATCATGATAATACAGAAATTGAGCTTGATGGTCCGGAAGGCAACTCAGCTCCAAATGTAGAGATTGACAAAGCAGCTGACATTGGAGCAAGTGACAAGAATCATCCAATGGAATGCGATCGAGATGCTAGCACGGAGGCAGGCAATGTAAAACTTTCTGGGATGACTGATTTCCTAGGGCCTTTGTTCAAGATCTTAGCTCAACCTAGTTGTAAACTGAAATTGAGCAAAAGTATCTTTAAACAGGTATCGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGCATCAACCTCGGGCATGACTGTGCGCTGTGCAGTGTTCAGAGACGATGTTTGCGATGCAATATTGGATGGAAAAGACATAGAAGTGTCATTTGACAACTTCCCCTATTATTTAAGTGAGAACACAAAAAATGTCTTGGTTGCAGCTTGCTTTATTCATTTGAAGCACAAGGAACATGCAAAATACACATCAGATCTCACAACTATCAACCCACGCATTTTACTTTCTGGACCTGCTGGGTCAGAAATATATCAAGAGATGCTGGCAAAAGCCCTTGCTAATTACTTCGGAGCTAAGTTACTCATATTTGATAGCCATGTGCTTTTGGATGGTTTATCAATCAAGGAAGCAGAATTAATCAGAGATGGAATTCTTGATACGGACCCATCGACTAGTGAAACGGATACGCCTAGCCCTTCAAATGCACCTACTTCATATGGCCTTGAATCTCAACCCAAAACTGAGACTGATGCCACGCCTTCCACTTCTGGGACAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATACAGTTGCTCGTCTTCTGGTGGCTTGTATCAGACATGTGCAAGGGGTCCACCTAATGGAAGTCGGGGAAAGGTTGTCTTATGTTTTGATGATAATCCTTCGTCCAAAATTGGTGTAAGATTTGATAAGCCCATACCTGACGGAGTTGATCTTGGAGGTGCCTGTGAGATGGGTCAAGGATTTTTCTGCAATGTTAGCGATCTTCGATTGGAAAACAGTGTTGTGGACGAGTTAGACAAATTACTTATCAATACATTGTTTGAGGTTGTTCATCGTGAGAGCAGAACTGCACCTTTTATTTTGTTCATGAAAGATGCTGAGAAGTCTATTGTAGGAAATGGAGATGCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCAGACAATGTTGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCAGGGGGTTTGCTTTTTACGAAATTTGGCAGCAACCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTACCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCTAATAAAGTTGCAATTCACATGCCACAGGATGAGGTACTTCTAGCATCCTGGAAGCAGCAGCTGGATCGAGATGCCGAGACTCTGAAAATCAAAGCAAATTTACATCACCTGGGCACAGTTTTGTATCGTTGTGGGATGGAATGTGAGGGACTTGAGACTTTGTGCATTAAAGACCAGGCACTTACTAATGAAAATGCAGAGAAGATAATTGGCTGGGCTTTGAGCCACCACCTCATGCAGAACCCTGAAGCCGATCCTAATTCAAAGCTTGTATTGTCCTGTGAAAGCATCCAGTATGGAATTGGAATCTTGCTGGCCATTCAAAATGAATCCAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTGTTGGCTGACGTCATTCCTCCTAGTGACATTGGTGTTACTTTTGATGACATCGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTGCAAAGGCCGGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGACCCCCAGGAACAGGAAAGACAATGCTTGCAAAGGCGGTTGCCACTGAAGCTGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTCTTCTCTCTGGCCAGTAAAATTGCTCCTAGTGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACTAAGGAGACCGAGCGAATTATTGTACTTGCAGCCACTAATAGGCCTTTTGACCTTGACGAGGCTGTCATCCGGAGGCTACCACGGAGATTGATGGTAAATTTGCCAGATGCTCCCAACAGAGCGAAAATATTGAAAGTCATACTAGCTAAAGAGGACTTATCTCCTGATATTGACTTGGACGCAGTTGCTAATATGACTGATGGATATTCTGGAAGTGATCTGAAGAACCTTTGCGTGACTGCAGCACATCGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGCGTGCTGCTGCTCTATCCGAAGGCAGGCCTCCTCCGGCATTAAGTGGCAGTGCTGATATCCGGTCTTTAAACATGGAGGACTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCTTCTGAATCCGTAAATATGACTGAGCTCTTGCAATGGAATGAACTATACGGCGAAGGTGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3657 0.449 MVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEGSTPEPAADPGECDAQIAGDGTGDGLTSGKGDATAAVAVALPIGDGSSPTLVVDKPRGSLSSWNIYQKQSPSSETSAPWCRLLSQSALNPNVSICPPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGALVKKNTNCVLNSGDEVVFGLLGNHSYIFQQLNADVAVKGAEIQGGVGKFLQLERRTGDPSAVAGASILASLSNFRQEIPRWKSVSQNTNKAHQGTDVSAHSAHHDNTEIELDGPEGNSAPNVEIDKAADIGASDKNHPMECDRDASTEAGNVKLSGMTDFLGPLFKILAQPSCKLKLSKSIFKQVSEERNGTRDMLAASTSGMTVRCAVFRDDVCDAILDGKDIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTSDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHVLLDGLSIKEAELIRDGILDTDPSTSETDTPSPSNAPTSYGLESQPKTETDATPSTSGTTKNCLFKIGDRVKYSCSSSGGLYQTCARGPPNGSRGKVVLCFDDNPSSKIGVRFDKPIPDGVDLGGACEMGQGFFCNVSDLRLENSVVDELDKLLINTLFEVVHRESRTAPFILFMKDAEKSIVGNGDAYSFKSKLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVAIHMPQDEVLLASWKQQLDRDAETLKIKANLHHLGTVLYRCGMECEGLETLCIKDQALTNENAEKIIGWALSHHLMQNPEADPNSKLVLSCESIQYGIGILLAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKETERIIVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDIDLDAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALSEGRPPPALSGSADIRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2417 1218 CDD FHA 132 230 - -
Acco04g2417 1218 Gene3D - 129 238 - -
Acco04g2417 1218 Pfam FHA domain 151 220 IPR000253 GO:0005515
Acco04g2417 1218 SUPERFAMILY SMAD/FHA domain 110 225 IPR008984 GO:0005515
Acco04g2417 1218 SMART AAA_5 950 1087 IPR003593 GO:0016887
Acco04g2417 1218 ProSitePatterns AAA-protein family signature. 1057 1076 IPR003960 GO:0005524|GO:0016887
Acco04g2417 1218 CDD RecA-like_ATAD1 917 1083 - -
Acco04g2417 1218 Pfam AAA+ lid domain 1107 1142 IPR041569 -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 525 562 - -
Acco04g2417 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 913 1193 IPR027417 -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 1 26 - -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 285 319 - -
Acco04g2417 1218 Gene3D - 1086 1180 - -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 523 562 - -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 1 80 - -
Acco04g2417 1218 Gene3D - 912 1193 IPR027417 -
Acco04g2417 1218 MobiDBLite consensus disorder prediction 298 312 - -
Acco04g2417 1218 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 912 1088 - -
Acco04g2417 1218 Pfam ATPase family associated with various cellular activities (AAA) 954 1083 IPR003959 GO:0005524|GO:0016887
Acco04g2417 1218 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 411 1217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2417 Acco-ChrAcco04 40866747 40880703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2417 913 1165 Calmodulin-binding Proteins AT3G56690 40.385 6.87e-42 165