Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2404 ATGGCGTCTCTACGCCATACCCCAATCTCACTCCAATCCACTCACCCTCCGCTCCCCAGAAACTTCGTCTCCCCTAACCCCCTCTTCAACCTCTCCTTCTCCGCCTCTACCTTCCCTTCTTCTCTCCAGCTCAAGCTCGCCGCCGCCACTGGCCGCCGCTCCCATGGCGGCGCTCTCGTAGCTAAGATGGTTTCCAGCGCCGCCGCAAGCTACGCCCTCGCCCTCGCTGACGTTGCCAAGGCCAACAACACTCTCGACTCTACAACCAACGACATCGAGAAAATCGAAGAAATCTTCGCCGACCCTGGCGTATTCTCCTTCTTCAACAACCCTACCATAGAGACAGAGAAGAAGAAAAAGGTTCTGGAGGAAATCGCCGCTTCCTCAAGCTTGCAGCCTCACACTCAGAATTTCCTCAACATTTTGCTGGACGCGAAGAGGATCGATCTGATCAACGATATAGCGAAGGAATACGAGCTTGTGTACAACGATCTGACGGAGACGGAGCTCGCGATCGTGAGCTCGGTGGTGAAGCCGGAATCGCAGCATTTGGCTCAGATAGCGAGGCAGGTGCAGAAATTAACTGGTGCGAAAAATGTGAGAATTAAGACATTGATTGATCCAAGTTTGGTGGCTGGCTTCACAATCAGATATGGGAATTCTGGATCTAAGTTGATTGATATGAGTGTGAAGAAGCAACTTGAAGAAATTGCTGCTCAACTTGATTTGGGCGATATCACGCTCACTGCATGA 753 0.5166 MASLRHTPISLQSTHPPLPRNFVSPNPLFNLSFSASTFPSSLQLKLAAATGRRSHGGALVAKMVSSAAASYALALADVAKANNTLDSTTNDIEKIEEIFADPGVFSFFNNPTIETEKKKKVLEEIAASSSLQPHTQNFLNILLDAKRIDLINDIAKEYELVYNDLTETELAIVSSVVKPESQHLAQIARQVQKLTGAKNVRIKTLIDPSLVAGFTIRYGNSGSKLIDMSVKKQLEEIAAQLDLGDITLTA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2404 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Acco04g2404 250 Gene3D - 67 159 IPR026015 -
Acco04g2404 250 PANTHER ATP SYNTHASE DELTA CHAIN 50 242 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 Coils Coil 78 98 - -
Acco04g2404 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 165 IPR026015 -
Acco04g2404 250 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
Acco04g2404 250 NCBIfam ATP synthase F1 subunit delta 68 241 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2404 Acco-ChrAcco04 40675492 40676244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2404 1 248 Primary Pumps ATPases AT4G09650 58.468 5.92e-96 279