Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2360 ATGGATGACGGCTGCCAGCATGAAAATGGAAGGCATAAGGTGGACTATTACAGAGGAACACATTCCCTGTGGAATATGGCTCCTCAACATCAAACAAAGGAACCGAATGCGTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAAGCTGCTATACGAGAACGGAATGCTGCTTTATCTGAAAAGAATGACGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAATGCCATAATGGAACGAGATAATGCCCTTGCTGCCCTTCAAATCCGGGACAATGCTGTCAACTTCCAACTGGGTAGTGGAATTCAACGTGGATCAAAGCGAATGCACCACTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATACAACACAAAGGATACCACCATAACTGAGGCCTTCCCAGTGACTGTAATAAATTCTGAAGCTGTTAAATCTCCTCAGGCAAAGAGAAAAAAGGAAGACAAGGCAATTTCTTCTAAGGCAATGAAGAGCAAAGGAAAGAAAATGGGTGAGGATTTAAACAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCTGAGTGGGATAGACAGGATATTGGATTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCAGTTTGCACATGCACCGGAGTACCACGGCAGTGCTACAAATGGGGAAATGGCGGATGGCAGTCATCCTGTTGCACCACCTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCCCGAATTGGCGGCCGGAAGATGAGTGGAAGTGTCTTTACAAGACTGCTCAGTAGGGTAGCAGCGGAAGGCCAAGATTTATCTATGCCATTGGATCTCAAGGATTACTGGGCCAGACATGGAACAAATCGCTACATCACAATCAAGTAG 939 0.4526 MDDGCQHENGRHKVDYYRGTHSLWNMAPQHQTKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNDALAARDEALRQRDEALVQRDNAIMERDNALAALQIRDNAVNFQLGSGIQRGSKRMHHSNHLVEMAEAAYNTKDTTITEAFPVTVINSEAVKSPQAKRKKEDKAISSKAMKSKGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSMPLDLKDYWARHGTNRYITIK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2360 312 Pfam GAGA binding protein-like family 1 312 IPR010409 -
Acco04g2360 312 PANTHER - 1 312 IPR010409 -
Acco04g2360 312 MobiDBLite consensus disorder prediction 159 188 - -
Acco04g2360 312 SMART GAGA_bind_2 1 312 IPR010409 -
Acco04g2360 312 MobiDBLite consensus disorder prediction 158 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2360 Acco-ChrAcco04 40074586 40075647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2360 1 312 BBR or BPC Transcription factor family AT2G21240 60.191 6.86e-136 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Acco04g2360 GAGA_bind 1.6e-100 No_clan