Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2359 ATGAAAGAATCGGAGAACGATATTCTCAACGTCTCCGGTCAGCTTCTTTCTTCTCTTCTGGATGAGATTCCCACTGTTGTTAACTTCAAAGGTAAATGGTCTCTAATTAGAGCCAAACTGTTCGATCTTCAGACTCAGCTCACTGATTTCTCCTCTGAGTTCCCTAATTACTCGTCCAATTCTCTTTCACTCGAGCTACTTCAGTCCATTTCACACACCCTAAACGATGCCGTTTCGCTTGCCAAAGAATGCCAGTCCCCAGAGTTGTCCCAGGGAAAGCTGAAGACTCAGAGCGACATCGATTCGGTCCTCGCTAAGCTGGATCGTCACGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTTTTGCAAGACGCCGCCGTTTCCAGCGCGTCTAAGAGAGAGGCCGTTCGGTCTGAATCCAGGAACTTGATTACTCATCTGCAAATCGGTTCTGCTGAGTCCAGGAACTCAGCGATGGACTCCTTGTTGGGTTTGCTCGAAGAGGATGATAAGAATGTGATGATAGCAGTGGCGCAGGGTGTGGTTCCAGTGCTTGTCCGCTTACTGGATTCTGCGTCTTACGAGATGAAGGAGAAGACTGTTGCTGCCATATCCAGAGTCTCCATGGTGGATAGTAGCAAGCATGTTTTGATCGCTGAGGGTTTGTTGCTTCTGAATCAATTGGTCCGAGTTCTCGATTCGGGGAGTGGATTTGCCAAACAGAAATCTTGCTTAACCCTCCAGGCTCTAAGTTTTTCCAGAGAGAATGCTAGAGCAATTGGGTCTAGTGGTGGAATCTCGTCACTTTTAGAGATTTGTCAAGCCGGCACTCCTGGTTCCCAAGCTTCAGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTCCCTGAAATTAGAGCGAATTTTATAGAGGAAAACACCGTTGTTGTTCTATTGGGGCTCGCCTCATCGGGTACTGCATTAGCGCAAGAAAATGCAATTGGGTGTTTGTCCAAGTTAGTTTCTGAAGACGAAAATTTGAAACTTTTGTTTTTAAAGGAAGGAGGGATCGAGTGCTTGAAGAATTTTTGGGACTCAGCTCCTACAGTTCGGAGTCTTGAAGTCGCAGCTGAGTTGTTGAGTCATCTGGCTTCTAATTCACCGATTGCTGAAGTTCTTGTTTCTGAGGGGTTTATACTCCGCCTTGTCGGTGTGTTGAATGGTGGAATTCTAGGGGTGAGAACTGCGGCAGCTCGAGCTGTTTATGCTTTGGGGTTGCACAACACAAAATCTAGGAAGGAGATGGGTGAATGTGGATGTGTGACCCCATTGATCAAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCGGCCGCAAAAGCATTGTCCGTACTCATGTTGTATGCGGGAAATAAAAAAATTTTCCGGAAGGATGAGAGGGGAATAGCTAGTGCTGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGACAAAAAATATCCTGTTTCTGTGCTGACCTCGCTTGTGCATTCAAAGAAATGCAGGAAACATATGGTGGCGGCTGGTGCTTGTGTATATACGCAAAAGCTTGTTGAGATGGATGTCGAGGGTGCCAAGAAGCTCTTGGACAGCCTTGGCAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.465 MKESENDILNVSGQLLSSLLDEIPTVVNFKGKWSLIRAKLFDLQTQLTDFSSEFPNYSSNSLSLELLQSISHTLNDAVSLAKECQSPELSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDAAVSSASKREAVRSESRNLITHLQIGSAESRNSAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLLDSASYEMKEKTVAAISRVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFAKQKSCLTLQALSFSRENARAIGSSGGISSLLEICQAGTPGSQASAAGVLRNLSVFPEIRANFIEENTVVVLLGLASSGTALAQENAIGCLSKLVSEDENLKLLFLKEGGIECLKNFWDSAPTVRSLEVAAELLSHLASNSPIAEVLVSEGFILRLVGVLNGGILGVRTAAARAVYALGLHNTKSRKEMGECGCVTPLIKMLDGKAVEEKEAAAKALSVLMLYAGNKKIFRKDERGIASAVQLLDPSIQNLDKKYPVSVLTSLVHSKKCRKHMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2359 551 Gene3D - 130 360 IPR011989 -
Acco04g2359 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Acco04g2359 551 Gene3D - 361 527 IPR011989 -
Acco04g2359 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Acco04g2359 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Acco04g2359 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 549 - -
Acco04g2359 551 SMART arm_5 337 378 IPR000225 GO:0005515
Acco04g2359 551 SMART arm_5 295 335 IPR000225 GO:0005515
Acco04g2359 551 SMART arm_5 379 419 IPR000225 GO:0005515
Acco04g2359 551 SMART arm_5 170 210 IPR000225 GO:0005515
Acco04g2359 551 SMART arm_5 421 461 IPR000225 GO:0005515
Acco04g2359 551 SMART arm_5 254 294 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2359 Acco-ChrAcco04 40053752 40055407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2359 126 410 U-box Gene Family AT2G23140 28.472 3.15e-17 83.2