Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2353 ATGGTGGCGTCTCTGGTGGCGGAGAGGGGAACAGAGGGAGGTTTTTCGACAAAGAACACCGCCAATTTCTCAAGTAATTGTCCTCAATCACCAAATTGTTTGATTCATCACTCGATTGGTTCACAGTGGAGGAGGATTCCTCTAAAAATGGGTGTTGAATATATTGCCATTCGTCAATGTCATCATTTTGATTCCTACTCAACAACGCTGCTTTGCCCTCTTCTGCATTGCTGTGAACTCATGAACTGGCCGATATGGTGGAAATGGAGGGCCATGGCCTTGGCTATAACGGTGTCGTTTCGTGTGGGTATTTGCTTCGACGACGCTCGTTCTCTTTCTTCGCTTGAAGATGCGATTCTCAGGCTTCCTGGTCAGCCCCAAGTTCGCTTTCGACAGTTCTCAGGATACGTTGAAGTCGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACTCTGATCCTGATTCCAAGCCTCTTGTTCTCTGGCTTAATGGAGGGCCTGGTTGTTCCTCCTTGGGAGTAGGCGCATTCTCTGAAAATGGGCCTTTCAGACCAAATGGGAAAGTCCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGTTTCTCTTATGCCAAAGGAAGTTCCTCCCATTTCACAGTAAACGATGAGGCAACAGCCAGGGATAACCTTGTGTTCCTGATACGCTGGTTCAAAAAATTCCCCCACTACAGGCACACAGACTTGTTTCTGACAGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGATATTCAATCTTAAAGGCGTAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTAAAGTGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGCACCAAGTAGGGAGAGAGACCAGTAAATTTGTAGACAAGTACGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAGGTTATTTGTCCTCAAACTGAACAAGCAAACGAGATGGTAGATGTATGTGTAGATGACAAAGTTACGAATTATTTAAACCAAAAAGATGTAGGCGAGGCACTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATTCTGGACTACGATATGCTCAACCTGGAAGTGCCTACCCTCCCTCTGGTTAGATCACTAATAAAAGCCGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTCGAAAACTGGCAAGGAAATTAGAACTAAATACAACAGTACCTTACAGAGTATGGTTTGCAGGACAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCCACAGTGAGAGGAGCCTCCCATGAAGTCCCTTTCTCACAGCCTGAGAGATCCCTTGTGATCTTCAAGTCATTCTTGGAAGGCAGGCCTCTACCTGCGAGAATCTTGACAAAAAGTTAA 1665 0.4432 MVASLVAERGTEGGFSTKNTANFSSNCPQSPNCLIHHSIGSQWRRIPLKMGVEYIAIRQCHHFDSYSTTLLCPLLHCCELMNWPIWWKWRAMALAITVSFRVGICFDDARSLSSLEDAILRLPGQPQVRFRQFSGYVEVDDKNEKALFYYFVESDSDPDSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGKVLIENKYSWNKEANMLYLETPVGVGFSYAKGSSSHFTVNDEATARDNLVFLIRWFKKFPHYRHTDLFLTGESYAGHYVPQLAKLMIEMNKKEKIFNLKGVALGNPLLEYATDFNSRAEFFWSHGLISDSTYKMFTKVCNYSRYVSEYYRDSVSPLCSKVMHQVGRETSKFVDKYDVTLDVCISSVLSQSKVICPQTEQANEMVDVCVDDKVTNYLNQKDVGEALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVRSLIKAGVQVLIYSGDQDSVLPLTGSRTLVRKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVIFKSFLEGRPLPARILTKS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2353 554 SUPERFAMILY alpha/beta-Hydrolases 122 547 IPR029058 -
Acco04g2353 554 ProSitePatterns Serine carboxypeptidases, serine active site. 260 267 IPR018202 GO:0004185
Acco04g2353 554 FunFam Carboxypeptidase 444 543 - -
Acco04g2353 554 ProSitePatterns Serine carboxypeptidases, histidine active site. 513 530 IPR033124 GO:0004185
Acco04g2353 554 FunFam Carboxypeptidase 112 547 - -
Acco04g2353 554 Gene3D alpha/beta hydrolase 114 547 IPR029058 -
Acco04g2353 554 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 220 IPR001563 GO:0004185|GO:0006508
Acco04g2353 554 PRINTS Carboxypeptidase C serine protease (S10) family signature 246 271 IPR001563 GO:0004185|GO:0006508
Acco04g2353 554 PRINTS Carboxypeptidase C serine protease (S10) family signature 513 526 IPR001563 GO:0004185|GO:0006508
Acco04g2353 554 PRINTS Carboxypeptidase C serine protease (S10) family signature 197 209 IPR001563 GO:0004185|GO:0006508
Acco04g2353 554 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 119 530 IPR001563 GO:0004185|GO:0006508
Acco04g2353 554 Pfam Serine carboxypeptidase 123 543 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2353 Acco-ChrAcco04 39885007 39889411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2353 406 546 Calmodulin-binding Proteins AT2G22960 28.369 3.49e-16 75.1