Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2346 ATGGCATCATCGGAGGTATCGATTAAGGGAAATGGTGTGAACGGGACGGGGGAAGGTTATGCTTCGGGTTACAACAACCATGACGATGCTAGGAAGGGTACAGAGGGTCAAAATGCTCATTCGTCAACCGGGAAAGAAGCAGAAGCTGCGCTTTACAGAGAGCTATGGCATGCCTGTGCTGGTCCTCTTGTTACAGTCCCTAGGGAAGGAGAGAGAGTTTTCTACTTCCCTCAAGGACACATAGAGCAGGTTGAGGCGTCTACCAATCAGGTGGCTGACCAGCATTTGCCCGTGTACGATCTTCCTTCCAAAATCCTCTGTCGGGTGATCAACGTGTTGCTGAAGGCGGAGCCAGATACTGACGAGGTGTTTGCCCAGGTCACCTTGGTTCCTGAGACTAATCAAGATGAAAACGCCGTGGAGAAGGAACCCCCCCCTCCTCCACCACCTCGATTTCACGTGCATTCGTTCTGTAAAACTCTAACTGCCTCTGATACAAGTACTCATGGTGGCTTTTCGGTTCTGAGACGACATGCTGATGAATGCCTGCCTCCTTTGGACATGACTAAGCTGCCGCCTACACAGGAGTTAGTGGCAAAGGATCTGCATGGCAATGAGTGGCGATTTAGACATATCTTTCGCGGTCAACCTCGCAGACACTTACTGCAGAGTGGTTGGAGTGTTTTTGTCAGCTCAAAGAGGCTCGTTGCTGGGGACGCCTTCATATTTCTTAGGGGCGAGAATGGGGAGCTGCGTGTTGGTGTCAGGCGGGCAATGAGACAGCAGGGTAATGTTCCGTCCTCAGTGATTTCCTGTCATAGCATGCATCTTGGTGTCCTTGCAACTGCTTGGCATGCTATCTCGACTGGCACCATGTTCACTGTTTACTACAAGCCAAGGACGAGTCCGGCGGAGTTTATTGTTCCATATGAACAATATATGGAGTCTCTAAAAAATAACTACACAATAGGGATGCGATTCAAAATGAGGTTTGAAGGTGAGGAGGCTCCAGAGCAAAGGTTTACTGGTACCATTGTTGGAATTGAAGATGCTGATCCCAACAGGTGGCCAAATTCCAAGTGGAGATACCTCAAGGTGAGATGGGATGAAACATCTAATATACCTCGCCCTGAAAGAGTCTCCCCTTGGAAAATAGAGCCTGCTGTTGCTCCCCTAGCTCTGAATCCTCATCCGATGCCCAGGCCTAAAAGGCCTCGTACTAATGTGGTTCCGTTATCCCCTGACTCCTCTGTTCTTACTCGAGAAGCATCATCTAAAGTTAGTAAAGACCCTTCACAGGCAAGTGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATACTCGACCTTGAGAGGCAATTTTGCAGAAAGCAACGAGTCTGTTACTGCAGACAAGTCTGTTGTGTGGCCACCTGCAGTAGATGATGAAAAGATCGATCTGGTATCCACCTCAAGAAGGTATGGGTCAGAGAGCTGGATGTCAATGGGGAGGCATGAGCCAACCTACTCAGATCTATTATCAGGCTTTGGAGCCAGTGGAGATTCTTTTCGTCCACCCTTGGCTGATCAGAATGTCCCTCTGGCTAGTCCTGCTAAAAAGCATTCGTTGGACCAAGAAGCAAGGTTTAATGCGCTGGCTAATCCATGGCCTGCAGGGCCCTCTGGTCTATCACTAAAACTCCCTAACTCTAATATCAAGGGTTCTGTGAATGGTGGTGATGTAACATGTCAAACTCCAGGGAATGTGCGGTATGGTGCATTTGGGGACTACGCTGTTCTCCATGGTCATAAAATCCAGCAATTACATGGGAATTCGTTGATGCCACCACCATCTACAGTACAATATGAGAGTTTCCGTTCAAGAGAGTTGATGTCAAAACCACTATCTACACAAACAAGTGAGCCTGTCAAGCCAAAAGATGGGGATTATAAGCTCTTTGGCTTCTCACTTATCGGCGGCAGCTCTATTACGCCTGAGCCATCTGTATCCCAAAGAAATGTGATAAACGAGTCACCAGGTCACATGCATATTGCATCTTACAATTCTCATGAAAATGATCATAAATCAGAACAACCGAGGGGCTCAAAACCAGCTGATGTTGCTGCTGTTGATGATCGAGAGAAGTCATTGCAAGCCTCTCAGACACATCTGAAAGAGATTCAAGCCAAACCACCTAGTGGTTCTGCTAGGAGCTGCACTAAAGTACACAAGAAAGGAATTGCACTTGGAAGACCAGCTGTTTGA 2241 0.4788 MASSEVSIKGNGVNGTGEGYASGYNNHDDARKGTEGQNAHSSTGKEAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHLPVYDLPSKILCRVINVLLKAEPDTDEVFAQVTLVPETNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKLPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISCHSMHLGVLATAWHAISTGTMFTVYYKPRTSPAEFIVPYEQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPNRWPNSKWRYLKVRWDETSNIPRPERVSPWKIEPAVAPLALNPHPMPRPKRPRTNVVPLSPDSSVLTREASSKVSKDPSQASGFPRVLQGQEYSTLRGNFAESNESVTADKSVVWPPAVDDEKIDLVSTSRRYGSESWMSMGRHEPTYSDLLSGFGASGDSFRPPLADQNVPLASPAKKHSLDQEARFNALANPWPAGPSGLSLKLPNSNIKGSVNGGDVTCQTPGNVRYGAFGDYAVLHGHKIQQLHGNSLMPPPSTVQYESFRSRELMSKPLSTQTSEPVKPKDGDYKLFGFSLIGGSSITPEPSVSQRNVINESPGHMHIASYNSHENDHKSEQPRGSKPADVAAVDDREKSLQASQTHLKEIQAKPPSGSARSCTKVHKKGIALGRPAV 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2346 746 Gene3D - 320 391 - -
Acco04g2346 746 CDD B3_DNA 155 257 IPR003340 GO:0003677
Acco04g2346 746 FunFam Auxin response factor 320 391 - -
Acco04g2346 746 FunFam Auxin response factor 155 259 - -
Acco04g2346 746 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Acco04g2346 746 MobiDBLite consensus disorder prediction 394 441 - -
Acco04g2346 746 Gene3D - 154 259 IPR015300 -
Acco04g2346 746 SMART B3_2 157 259 IPR003340 GO:0003677
Acco04g2346 746 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 743 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco04g2346 746 Pfam Auxin response factor 283 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco04g2346 746 MobiDBLite consensus disorder prediction 674 746 - -
Acco04g2346 746 SUPERFAMILY DNA-binding pseudobarrel domain 153 286 IPR015300 -
Acco04g2346 746 MobiDBLite consensus disorder prediction 410 441 - -
Acco04g2346 746 MobiDBLite consensus disorder prediction 1 45 - -
Acco04g2346 746 MobiDBLite consensus disorder prediction 679 712 - -
Acco04g2346 746 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2346 Acco-ChrAcco04 39803595 39807589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2346 1 743 B3 DNA Binding Superfamily AT5G62000 63.827 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco04g2346 B3 4.2e-21 CL0405