Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2300 ATGAAGGGGACTCGCGTTGGCTTCCCAGTTTTCTTCGTCCTCCTTCTTCTTTTAGCTTCTGAAGGGATGGCGACGGAAACTCAGGCCATCTTCAGACATCCATGCCAGTCTCCCAGCAAAAGGTTCTCAGGCATATGCGTGAGCGACCACCGCTGCGCCGGCGTCTGCCAATCCGAAGGTCACCCCAGCGGTGAGTGCGAAGGCATACGCCGCCGCTGCCTTTGTTCTGTCCCCTGCTGA 240 0.5792 MKGTRVGFPVFFVLLLLLASEGMATETQAIFRHPCQSPSKRFSGICVSDHRCAGVCQSEGHPSGECEGIRRRCLCSVPC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2300 79 Gene3D - 33 79 IPR036574 -
Acco04g2300 79 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Acco04g2300 79 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Acco04g2300 79 SMART gth_4 34 79 IPR003614 GO:0006952
Acco04g2300 79 PANTHER DEFENSIN-LIKE PROTEIN 1 10 75 - -
Acco04g2300 79 SUPERFAMILY Scorpion toxin-like 34 79 IPR036574 -
Acco04g2300 79 CDD Knot1 44 75 IPR003614 GO:0006952
Acco04g2300 79 Pfam Gamma-thionin family 35 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2300 Acco-ChrAcco04 39225707 39226030 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2300 9 79 Plant Defensins Gene Families AT2G02120 43.662 9.52e-15 60.8