Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2291 ATGGCTTCCCCTCCGGTGAATTCTTTCCCTATAGCGTACCAGGCATGGACAACGGTCGCCGTACCGGACTGGCTGAACAAAGGGGACAACGCCTGGCAGATGATCTCAGCAACTCTGGTGGGGATACAGAGCATGCCGGGGCTTGTAATTCTCTATGGTAGCATTGTGAAGAAGAAATGGGCCGTCAACTCTGCTTTCATGGCCCTATATGCCTTCGCCGCCGTTAGCATCTGCTGGGTCACTTGGGCCTACAAGATGTCCTTCGGTGACAAGCTTTTGCCCTTCTGGGGCAAGGCCGGCCCTGCGTTGGGCCAAAAGTTTCTTGTCGGTCAGGCGGCGCTGCCGGCGACGCCCCATAAATTTAAGAACGGCGGGCTGGAGACGCCGGAGGTGGAGCCGTTCTACCCGATGGCGACCATGGTGTGGTTTCAGTGCGTGTTCGCCGCCATCGCGGTTGTTCTACTTGCCGGATCGGTGCTGGCGAGGATGAATTTCAAAGCTTGGATGATGTTTGTACCGTTATGGCTGACGTTTTCGTATACCGTCGGAGCTTTCAGCTTGTGGGGCGGTGGGTTCTTGTTTCACTGGGGTGTTATGGACTACTCCGGCGGCTACGTCATCCATCTTTCCTCTGGGATCGCTGGTTTCACCGCCGCTTACTGGGTGGGACCAAGGTTGAAGAAGGATAGAGAGAGGTTTCCGCCCAACAATGTGTTGCTGACGCTGGCGGGGGCGGGGCTGTTGTGGATGGGATGGGCAGGCTTCAACGGCGGCGATCCCTACTCGGCCAACACCGACTCCTCCATGGCAGTTCTCAACACCAACATATGCGCCGCCACTAGTCTGCTAGTGTGGACCTGTCTTGACGTCATCTTCTTCCACAAACCCTCCGTCATCGGAGCCGTCCAGGGCATGATCACCGGTCTCGTCTGCATCACTCCCGGTGCTGGTCTCGTTCAAGGATGGGCAGCCATAGTGATGGGAATTTTATCAGGCAGTGTTCCATGGTTCAGCATGATGATATTAGGCAAGAAGCTCAAAATATTCCAAATGATCGACGACACTCTCGCCGTCTTCCACACTCACGCCGTTGCCGGACTTCTTGGCGGCATCCTCACCGGCCTCTTTGCGGAGCCTCGCCTCAGTGCTCTCTTCCTCCCCGTCACCAACTCAAGAGGAGGCGTGTACGGCGGCTCCGGGGGAGTCCAGATCCTGAAACAAATAGTGGGAGGGCTGTTCATTGTAGGATGGAACATAGTGGTGACATCCATTATCTGTGTGGTCATAAGTTTCATAATTCCTCTGAGGATGTCGGACGAGGAACTGTTGATCGGAGACGACGCCGTTCACGGAGAAGAAGCTTATGCGTTGTGGGGCGATGGAGAGAAGTTGAGTATATATTCTGACGATACTACTACTCATCACAATATTGCAGTTTTAGCATCAAGTGGTGCCACTCAAGTCGTCTAA 1470 0.5469 MASPPVNSFPIAYQAWTTVAVPDWLNKGDNAWQMISATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVSICWVTWAYKMSFGDKLLPFWGKAGPALGQKFLVGQAALPATPHKFKNGGLETPEVEPFYPMATMVWFQCVFAAIAVVLLAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRLKKDRERFPPNNVLLTLAGAGLLWMGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTCLDVIFFHKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSVPWFSMMILGKKLKIFQMIDDTLAVFHTHAVAGLLGGILTGLFAEPRLSALFLPVTNSRGGVYGGSGGVQILKQIVGGLFIVGWNIVVTSIICVVISFIIPLRMSDEELLIGDDAVHGEEAYALWGDGEKLSIYSDDTTTHHNIAVLASSGATQVV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2291 489 ProSitePatterns Ammonium transporters signature. 200 225 IPR018047 GO:0008519|GO:0016020|GO:0072488
Acco04g2291 489 Gene3D Ammonium transporter AmtB like domains 10 458 IPR029020 -
Acco04g2291 489 NCBIfam ammonium transporter 29 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Acco04g2291 489 FunFam Ammonium transporter 12 458 - -
Acco04g2291 489 SUPERFAMILY Ammonium transporter 24 437 - -
Acco04g2291 489 PRINTS Rhesus blood group protein signature 325 343 IPR002229 GO:0005886
Acco04g2291 489 PRINTS Rhesus blood group protein signature 144 160 IPR002229 GO:0005886
Acco04g2291 489 PRINTS Rhesus blood group protein signature 270 292 IPR002229 GO:0005886
Acco04g2291 489 PRINTS Rhesus blood group protein signature 239 257 IPR002229 GO:0005886
Acco04g2291 489 PANTHER AMMONIUM TRANSPORTER MEP2 17 464 IPR001905 GO:0008519|GO:0016020|GO:0072488
Acco04g2291 489 Pfam Ammonium Transporter Family 31 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2291 Acco-ChrAcco04 39135109 39139589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2291 137 489 Inorganic Solute Cotransporters AT2G38290 67.967 5.61e-168 476