Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2281 ATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGTCTCCTGCACTAAGGATTATTCAATACAGCATGCTTCCTTTGAGGGAGCTCGCCGATGCGATAGCTGAAAAGTTGCAGGAACAGGTGTATGTGGGTGCTGAGCTGCATGGAAAAAAGGATGATGGAGAACATCCCTGCAAAATATCGAAAGTCGTGCAGGAAGGGGTTGATGAATTCCGTTATGAGGTAGCTTGGCTTGACAAAAACAAGAAAACAATTGAAAAGGCAGAACTCAGTGCCAAGGATTTAGTGCAGAAGAAGTTTCCTTTTAGCAGGAATATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCTTGGGTGATACACGATGAATTGGCACAAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAGGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATGTAGATGGTGAAGCTGAGAATTGCAAAAAGAGGAAGTCAGATCACTCAAAAAATGATGGCTCCTCTTCAGTGAAAGAAAATGGCCAATGTAAGGAAGAACCTATCAAATATCCGATTGATGATTTATTGGTGCAGCCTAGTCCAAGGGATCCCCTTTTTGCTGATCGTCCTTCTCCATCAAGAGACTTCAATGTTCCAGTTCATTGTGTAGGGGATCTCTTAATGATTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCCACTCTCTGGAAGATTTTGAAAACTCTCTCTGCCACAAGGAAAGCAATGTTGTTCTTCTTGTGGAATCTCATGCAGCACTCTTGCGGGTGCTCATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAGAGAAAACGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCAGTTTGAAGCTACCATAAAAAGGGGACATTATGGCCTCATTGATATCAATGCTAAGCTAGAAATCTTGTGTGAATTGGTCAATCAAGTTCTTGAAACCTCCATTTTTAGGGAAAAGTTGGATGAGGTTATTGAACAGCGGCTGGCACTTGGTGCTACTAGAAGAGGAGAAGCACTAGAAGATGGTAGAAAAAGAAGAGAAGAGAAGGAACGGTTGAAAGCTGAGATTGAAAGCAATGGGAGTGTGGATGGGCACTGTAAAACAAATGGAGCAACTGTGTCAACAAAAAATAATCACAGTAGACAGAACGTAGACACAGGGAAGAAAAGACATGGAGAAAAGGAATCATCTAGGAATGGGGATGCTTTGGGTGGAAGTGTGGATAAGCATTCAAATGGTGCATCCAAAAAGTCCTCTAAGAAACTGAGTTTAGAACTGAAAGAACCAGCAGAAAATGGAAATGAATCATCCAGAAAGGAATCGCAGAAGCAATTAAATGTGGAGAAGGATCCATCAGATAAGAATAGTATAGAACAGAGGAGAGAATATTTTGAGCGAGAGATGGAAAAACGATTTGTTCGTACAAGTTCCCTTGGTAAAGACAGGCATTATAACAGGTATTGGTGGTTTCGTCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGATGCATTGATGAAGACACTGAATCGCAAGGGTGTGCGGGAAAGAGCATTGCAAAATCAGCTGGAAAAATATTATAGTAGAATATGTATGGAACTTCAGAAGAGATCCAAGGAACAGACACAAAAGATTGCGCTAGACGAGTCTGTGCTCCGAAGGTCTACTCGTGTCCGTGCACCACCTAGAGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGAAGAGTAG 1941 0.4106 MVSEKRATEKVQQIPKELMSPALRIIQYSMLPLRELADAIAEKLQEQVYVGAELHGKKDDGEHPCKISKVVQEGVDEFRYEVAWLDKNKKTIEKAELSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELAQNYGISTDIPEELKGRAFFNNGLLICNKKRKNEDVDGEAENCKKRKSDHSKNDGSSSVKENGQCKEEPIKYPIDDLLVQPSPRDPLFADRPSPSRDFNVPVHCVGDLLMIWDFCTSFGRLLHLSPHSLEDFENSLCHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKITMINWQEYLCDFLEMINVPGLRQFEATIKRGHYGLIDINAKLEILCELVNQVLETSIFREKLDEVIEQRLALGATRRGEALEDGRKRREEKERLKAEIESNGSVDGHCKTNGATVSTKNNHSRQNVDTGKKRHGEKESSRNGDALGGSVDKHSNGASKKSSKKLSLELKEPAENGNESSRKESQKQLNVEKDPSDKNSIEQRREYFEREMEKRFVRTSSLGKDRHYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELDALMKTLNRKGVRERALQNQLEKYYSRICMELQKRSKEQTQKIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2281 646 Coils Coil 85 105 - -
Acco04g2281 646 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 2 644 - -
Acco04g2281 646 SMART testlast3 236 297 IPR018501 -
Acco04g2281 646 MobiDBLite consensus disorder prediction 435 451 - -
Acco04g2281 646 MobiDBLite consensus disorder prediction 171 198 - -
Acco04g2281 646 MobiDBLite consensus disorder prediction 388 511 - -
Acco04g2281 646 MobiDBLite consensus disorder prediction 415 434 - -
Acco04g2281 646 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 526 592 IPR028941 -
Acco04g2281 646 Pfam DDT domain 237 294 IPR018501 -
Acco04g2281 646 ProSiteProfiles DDT domain profile. 236 297 IPR018501 -
Acco04g2281 646 ProSiteProfiles WAC domain profile. 1 62 IPR013136 -
Acco04g2281 646 MobiDBLite consensus disorder prediction 171 190 - -
Acco04g2281 646 Coils Coil 392 412 - -
Acco04g2281 646 MobiDBLite consensus disorder prediction 388 413 - -
Acco04g2281 646 MobiDBLite consensus disorder prediction 473 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2281 Acco-ChrAcco04 39011757 39016754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2281 512 591 Homeobox Transcription Factor Family AT5G44180 41.573 8.70e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Acco04g2281 WSD 6.8e-22 No_clan