Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2239 ATGAACGGTGAATTGGAGTTACCTCCTGGGTTCAGATTCCATCCAACAGACGAGGAGCTCGTGAATCACTATCTCTGTACCAAATGTGCAGCTCAGTCCATTGCCGCTCCCATTATCAAAGAGATCGATCTCTACAAGTTTGATCCATGGCAACTTCCTGAAATGGCTCTGTACGGCGAGAAGGAATGGTACTTCTTTTCACCGAGGGACCGAAAATATCCGAACGGTTCGAGGCCGAACCGGGCGGCCGGAAGTGGGTACTGGAAAGCAACCGGAGCCGATAAGCCGATTGGTAAGCCGAAGCCAATGGGAATAAAGAAGGCACTCGTGTTCTACGCCGGTAAGGCCCCCAACGGCATCAAAACGAACTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCCGCCGGCAAGAAAAAAAATCTAAGGCTTGATGATTGGGTGTTATGTCGAATTTACAACAAGAAAGGGACGATTGAGAAATACAATGTGGTGGATCAGAAACCCGGCAAGTTCTTGGAATTCCATGACCATGAGACCAAACCAGAAATCAAACCGTACGAGCACAATAAGGTGCAGGCACCGACCGCGGCGGGGGCGTTCACGAATGACCAATTCTACATGGACACGTCGGACTCGGTGCCGAGGCTGCACACGGACTCGAGCTGCTCGGAGCACGTGGTTTCGCCGGACGTCACGTGCGACAAGGAGGTACAGAGCGAGGCCAAGTGGAACGAGCTAGGGCTCGGAGAAGACGATGGGCTTGATTTTGTATTCAATTATATGAATAATCTCTCTGGAGAAGACCCTTTCGGCTCTTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCACGTTTCAACCGAAGCCATTTTGA 897 0.5072 MNGELELPPGFRFHPTDEELVNHYLCTKCAAQSIAAPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPMGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTIEKYNVVDQKPGKFLEFHDHETKPEIKPYEHNKVQAPTAAGAFTNDQFYMDTSDSVPRLHTDSSCSEHVVSPDVTCDKEVQSEAKWNELGLGEDDGLDFVFNYMNNLSGEDPFGSSVQYQMNQLSPLQDMFTFQPKPF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2239 298 FunFam NAC transcription factor 16 161 - -
Acco04g2239 298 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Acco04g2239 298 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 215 - -
Acco04g2239 298 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Acco04g2239 298 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Acco04g2239 298 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2239 Acco-ChrAcco04 38552107 38553344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2239 1 298 NAC Transcription Factor Family AT1G01720 63.696 9.46e-126 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2239 NAM 2.3e-38 No_clan