Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2236 ATGGCTGTGGCGATCCCAGCAGCGGCAACTTCCACAACTTTCGAAAAAATGAGCCCCATTACTGTGCAACAAGCCATTGATGCTCTTCTCAAATGGAAGAATTCAAAGTCTGAGATCGAGAAACCAAAGCTATTTGACTCAGACGATGAATTCGTCTACCTCGTTCTCACCCTCAACAAACTTCCTCCAAAGTCTCGTGTTAATGCCCACAAGATCCCTCTTCCGCATTCTCTTCTCTCCGAATTTTCCGAGCTCTGTTTGATCATCGATGACAGACCCAAGTCGACTCTTACCAAACAGGACGTGCAGAAGAAGATCAAATCGGAGAATATTCCAGTTTCTAAGGTTATCAAACTTTCGAAGCTTCAGTCTAATTATCGTCCCTTTGAGGCTAAGCGGAAGCTCTGTGGTTCTCACCACATGTTTTTCGCCGATAAAGGGGTGATTCCTCTGCTGCCACGGCTGTTAGGTAAGCAATTCTTTAAGAAGAAGAAGATTCCTGTGCCATTGGATTTGAAGCATAAAAATTGGAAGGATCAGATTGAGAGGGCATGCTCGTCGGCGTTCTTGTTTCTCAGGACAGGTACGTGTAGTGTGGTGAGAGTTGCCAAAGTGTCTATGGAGAGGGACGAGATTGTTGCTAATGTGGCTGCGGCTATCAGTGGTGTTGTTGAACTCTTGCCCAAAGGTTGGGGTTCGGTACGGTCTTTTCATTTGAAATTAATGGATTCGCTTGCGTTGCCGCTTTATCAGGTAATCCCTGATATGAAATTGAAGATTGAGGGAGTTAAGGGCATAGAGGAAGTCAACGATGAAGATGGAGATATTGTGAAAGATGAGGCTAAGAAGGATCTTAAAGTTGTTAAGAAGAAGGGGAGGATCCATGAAGTTCGGTACATGGATGATAATGTAGGTCACGAGCTCAGTCAAGATGAGTCAGGTGTTGAGGAAGATGGGGATGGAGAAAAAGAAGATGATGATGATGATGATGAAATGACTGTTGAACCAGTGGTAAATAAGAAGAGGAAAGGATCAAAATCTGACAAAGAGGTTCTTAGTGAGGTGAATAGTGAGAAAAAATTGAAGAAGGCAACCAAGAACAAGGATAAAAGTAAGAAAGATGGGTTGTCTTCTAAGAGAAAGACGGAAAATGATTTACCTGCTATGGATGAAGTTTCTGGCAAGAAGAAGAAGAACAAGGAAAGTGGAGAAGTGAAAGTAAAAGCTAAGAAAATTAAGAAGGCTACTTCGTCTGAGTAA 1260 0.4278 MAVAIPAAATSTTFEKMSPITVQQAIDALLKWKNSKSEIEKPKLFDSDDEFVYLVLTLNKLPPKSRVNAHKIPLPHSLLSEFSELCLIIDDRPKSTLTKQDVQKKIKSENIPVSKVIKLSKLQSNYRPFEAKRKLCGSHHMFFADKGVIPLLPRLLGKQFFKKKKIPVPLDLKHKNWKDQIERACSSAFLFLRTGTCSVVRVAKVSMERDEIVANVAAAISGVVELLPKGWGSVRSFHLKLMDSLALPLYQVIPDMKLKIEGVKGIEEVNDEDGDIVKDEAKKDLKVVKKKGRIHEVRYMDDNVGHELSQDESGVEEDGDGEKEDDDDDDEMTVEPVVNKKRKGSKSDKEVLSEVNSEKKLKKATKNKDKSKKDGLSSKRKTENDLPAMDEVSGKKKKNKESGEVKVKAKKIKKATSSE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2236 419 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Acco04g2236 419 Gene3D - 95 187 IPR016095 -
Acco04g2236 419 CDD Ribosomal_L1 22 249 IPR028364 -
Acco04g2236 419 MobiDBLite consensus disorder prediction 313 333 - -
Acco04g2236 419 MobiDBLite consensus disorder prediction 300 419 - -
Acco04g2236 419 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 25 244 - -
Acco04g2236 419 Pfam Ribosomal protein L1p/L10e family 41 244 IPR028364 -
Acco04g2236 419 MobiDBLite consensus disorder prediction 334 419 - -
Acco04g2236 419 SUPERFAMILY Ribosomal protein L1 42 250 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2236 Acco-ChrAcco04 38488713 38489972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2236 139 240 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 32.353 8.30e-10 56.6