Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2225 ATGTCTGAAAGAGGAAAGAGGAAGGACGAGCACGATCAAGCGTCCGACGGCGATTCAGAGGGCCACGCGCCACCTAAGAAGTACCAAAAGAAGGATTCCGGTGATTCTGATGACATCGTCGTCTGCGAGATATCCAAGAACAGACGGGTAACCGTGAGGAACTGGAATGGCAAGATTTGGGTGGACATTCGTGAATTTTACGTCAAAGATGGGAAGCAATTGCCTGGAAAGAAAGGTATCTCACTGAGCATTGACCAGTGGAAAGTGCTTCGGGATCATGCTGATAAAATTGACGACGCTCTTACGGAGGATTAG 315 0.4857 MSERGKRKDEHDQASDGDSEGHAPPKKYQKKDSGDSDDIVVCEISKNRRVTVRNWNGKIWVDIREFYVKDGKQLPGKKGISLSIDQWKVLRDHADKIDDALTED 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2225 104 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 17 103 IPR045125 GO:0003713|GO:0060261
Acco04g2225 104 Pfam Transcriptional Coactivator p15 (PC4) 42 93 IPR003173 GO:0003677|GO:0006355
Acco04g2225 104 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
Acco04g2225 104 MobiDBLite consensus disorder prediction 1 36 - -
Acco04g2225 104 FunFam Putative transcriptional co-activator 32 104 - -
Acco04g2225 104 Gene3D Transcriptional Coactivator Pc4; Chain A 31 104 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2225 Acco-ChrAcco04 38335953 38337559 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Acco04g2225 PC4 3.4e-26 CL0609