Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2219 ATGGGCCACTATCGTCGTGCAGAATTCGTTTTCTCTATTCCCAATACACAGAGAGACAGGGTGTTGGAAAGCCCGATTAGAGTGAGAAAGGAAGGAAAGCGACTCGGTTTAGGGCGGGAGAAACGACGGCGTTTTCCTCGTCTCCTCCGCTTGGAGGTACCACTTGCGAGGTACAGTGCGACGGAGAGGCAAATGAAGCTGACCGGAGACGGTGTGGCGTCCGAAGAAGGCACGAGTGACTGCGACGGTGGTCGGACGGTCGTCGTTGGGGTGAAGTTGGATCCTCGGAGTAGGGAATTGCTCACTTGGGCCCTCGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCTCTTCACGTTCTCGGCAATATACCTGCGGGTGCAGGATCGCTCCTCTCTCTTGTAAATACTTTTGAATCTGTTCTCGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTGAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTATTGTACGGGAGGCGAAATCGTTTGGTGCGTCAACTGTAATTGTGGGGACTTCTAAAACGCATCACACAATCCGGTCATCGGCATTCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCGTTCCACCGAGAGGCTACAAAAATATGCGGTGCTCAAGTAAAACTAAATGAAGGCCCAGCTTTGTTAACAAAATCCTTCAAGCCTGGTACAAAGACAAATCTCATGAACTGTGAATATTGTGAGCGGGTGCTAGCACTTCCAGAGAGTACTGATATTGAAGATGTGGCTGATGATCAAGAAAAGAAAGATTCACTAGCTTTAGTACCGCTTCAGAAAATTGGCGATGGTCAAGGTTGTGCAACTCTGGTTCAGGAATCAAACCAGTCTAAACATGGCTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCACGTGCAGAAACCGTATGTGAGCCATCCATATGTTTTTCAACGGGCAGTGAAAACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAACATTGACAAAAATGACAATACTACCCTTGATGGGCAGAGTGGTGCCATTGTGCCATTCAGATATACTGCTAACTCTGGCTTCAGCAACTTTCATGAAGAATTGTCCAGCTTACAGGAGAAGTACTCATCTTCATGCAGAGTGTATACTTTCCAAGAACTTACTTCTGCAACCGCTAACTTCTCGCCTGAAAATTTGGTTGGCAAAGGCGGCAGTAGCTATGTGTATAAAGGATGTCTTCCAGATGGCAAGGAGGTGGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATGTGGGTTTTCATTCGACGACAATAATTTGCTTTTGGTCTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTTGGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTGTTGCTGAGGCATTAGACTTTCTGCATAATGGCTGTGCACAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCTGATTTTGGGCTAGCCAGTTGGGGTTCTTCATCATCCCATGTTCCTTGTACTGATGTGGCCGGAACCTTTGGATACCTGGCTCCAGAGTACTTTATGCATGGTAGGATAACTGACAGAATTGATACATATGCATTTGGTGTTGTGCTTCTTGAACTTCTTTCTAGCAGGAAGCCCATCAACAACGAATCCCCTAAGGGCCAGGAGAGCCTTGTGATGTGGGCAAGACCAATTCTAATGGATGGAAAGCTCTCCCAGTTGCTTGATTCAAGCCTCGGCGATCCTGATCATGGGCTGATTGACAGAATGGTTTTGGCTGCTACCCTTTGCCTCCGACGATCACCTAAATGTCGACCTCAAATCAGCATCATATTGAAACTTCTGCAAGGTGATGAGGAAGTCACAAGCTGGGCAAAACAAGAAGTTGGTGCACCAGAAGAACTTGACGCCTTTGATGGGGGACCAAATAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACCTGGAAGATGATACAGTTTCTGTAAGTAGCTCTGAGCCGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGATTAA 2289 0.4578 MGHYRRAEFVFSIPNTQRDRVLESPIRVRKEGKRLGLGREKRRRFPRLLRLEVPLARYSATERQMKLTGDGVASEEGTSDCDGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVLGNIPAGAGSLLSLVNTFESVLAVYEGFCNLKQVDLKLKVCRGESARKLIVREAKSFGASTVIVGTSKTHHTIRSSAFVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGAQVKLNEGPALLTKSFKPGTKTNLMNCEYCERVLALPESTDIEDVADDQEKKDSLALVPLQKIGDGQGCATLVQESNQSKHGWSVLRQVFLPKKHVQKPYVSHPYVFQRAVKTSWHSSAVVHPDLKQINIDKNDNTTLDGQSGAIVPFRYTANSGFSNFHEELSSLQEKYSSSCRVYTFQELTSATANFSPENLVGKGGSSYVYKGCLPDGKEVAVKILKPSEDVVKEFLLEIEIITTLHHKNIISLCGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVPCTDVAGTFGYLAPEYFMHGRITDRIDTYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILMDGKLSQLLDSSLGDPDHGLIDRMVLAATLCLRRSPKCRPQISIILKLLQGDEEVTSWAKQEVGAPEELDAFDGGPNNIQSHLNLALLDLEDDTVSVSSSEPSVSLEDYLQGRWSRSSSFD 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2219 762 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 390 495 - -
Acco04g2219 762 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 85 189 - -
Acco04g2219 762 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Acco04g2219 762 PANTHER OS08G0249100 PROTEIN 137 703 IPR046958 -
Acco04g2219 762 FunFam Putative receptor-like serine/threonine-protein kinase 496 706 - -
Acco04g2219 762 Pfam Protein kinase domain 424 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2219 762 Pfam Universal stress protein family 85 209 IPR006016 -
Acco04g2219 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Acco04g2219 762 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 84 217 - -
Acco04g2219 762 Gene3D Phosphorylase Kinase; domain 1 384 495 - -
Acco04g2219 762 Gene3D Transferase(Phosphotransferase) domain 1 496 706 - -
Acco04g2219 762 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2219 762 SUPERFAMILY Protein kinase-like (PK-like) 401 690 IPR011009 -
Acco04g2219 762 CDD USP_Like 86 211 - -
Acco04g2219 762 SMART serkin_6 421 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2219 762 Gene3D HUPs 84 217 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2219 Acco-ChrAcco04 38269635 38273140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2219 409 761 Trihelix Transcription Factor Family AT1G70460 39.503 9.01e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco04g2219 Pkinase 9e-41 CL0016