Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2211 ATGGGCGCAATTAAGAAATTCAATTTGAACCCAAGATCTTCATCCACTATTCTAAAGGTAGAGAGAGGCAGAGTACAAAAGAAGGTTACAAGTAAGAATGTAGAAAGAGCTTTGAGGCTAAAGAGATCAATCATTGATTATGAGTCTCATGCTTTTGAGCGAGCGAAAGAGGTTCAAGCAAATCTATCCCATGAATTTCCAAGCCTTATCAAATACATGCTCCCATCACATGTTTCTGGTGGATTTTGGCTGGGTTTTCCAAAACATTTCTGTGAAATGCATTTGCCTAAGGTTGATACTATGCTTGTTTTGGAAGATGAGAATGGAAGAGAATATGAAACAAAATATCTTACCGAGAAGGCGGGCTTAAGTGGGGGATGGAGAGGCTTTTCCATTGCTCACAATTTACTTGAGGGGGATGTTTTAGTTTTTCATTTAATCCAGCTTCGCAAGTTCAAGGTGTTCATCATAAGATCTCATGGGTCAAACGAAGTGGATGTTGCGCTCGACCTTCTATATTTAGATGGTTGCATGAAGCAACATGATTCTAATGTTCCCGAAGAAAATGATCCAAGCAATGGCACAATGATATATGATGCTGATGTATCGCCATCGGATCAACATGAAAATGCTAGTGATCTAGATGAACATCTTGTCTCTGAAGTTTTGAATGGGATTAGATTATCAGAATCTTCGATCACTTTCGAAGAAGTCACTAGTATTGAGAGATTCAGCATTGTGGTTAATGGTCTGGTACTTGACTCTGAACTATCCAAACACCTCAAGACCAAGTACTATGAGCTTTGCTGTAGTCAAGGAATGTTTCTTCATGAGCACCTTCTTGAAGGTCAGAACTGTAAACTTGTGGTTGGAATGATATGTGAGACCATTAATATTGCCGATGCCATTAGATCCAGCAAGATCACAACCTCTTGGGATCGTTTTGAAGTGTGGTATAAATCTTTAAAAGGCCTCAAAATCTTTGGCATGAATGTTAGTTTCTTGCTTGCTAGGCTAGAACAACTCATGAGTTTAGCTTCAAAATCCAAGAGGTACACGGAGACAAGAATTAAACGAGACAAAGCTAAAGAGGAAAAGGAAGTTATTGAACTAAAGCTTGAGGAAGTGAAAGAGACCATTAGTAGACTTGATGTTGAGCTTGACACCCAAAATTTGAACCCTGAGAGGTTGGAGGCTGAGTTTGAAGATCTGGCTAATACCCCTTGGTAA 1230 0.3935 MGAIKKFNLNPRSSSTILKVERGRVQKKVTSKNVERALRLKRSIIDYESHAFERAKEVQANLSHEFPSLIKYMLPSHVSGGFWLGFPKHFCEMHLPKVDTMLVLEDENGREYETKYLTEKAGLSGGWRGFSIAHNLLEGDVLVFHLIQLRKFKVFIIRSHGSNEVDVALDLLYLDGCMKQHDSNVPEENDPSNGTMIYDADVSPSDQHENASDLDEHLVSEVLNGIRLSESSITFEEVTSIERFSIVVNGLVLDSELSKHLKTKYYELCCSQGMFLHEHLLEGQNCKLVVGMICETINIADAIRSSKITTSWDRFEVWYKSLKGLKIFGMNVSFLLARLEQLMSLASKSKRYTETRIKRDKAKEEKEVIELKLEEVKETISRLDVELDTQNLNPERLEAEFEDLANTPW 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2211 409 CDD B3_DNA 67 158 IPR003340 GO:0003677
Acco04g2211 409 Pfam B3 DNA binding domain 70 156 IPR003340 GO:0003677
Acco04g2211 409 SUPERFAMILY DNA-binding pseudobarrel domain 64 162 IPR015300 -
Acco04g2211 409 SMART B3_2 69 161 IPR003340 GO:0003677
Acco04g2211 409 Gene3D - 47 160 IPR015300 -
Acco04g2211 409 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 48 161 IPR044837 -
Acco04g2211 409 ProSiteProfiles B3 DNA-binding domain profile. 69 160 IPR003340 GO:0003677
Acco04g2211 409 Coils Coil 352 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2211 Acco-ChrAcco04 38158046 38160404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2211 46 158 B3 DNA Binding Superfamily AT3G19184 53.982 1.38e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco04g2211 B3 4.4e-15 CL0405