Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2192 ATGGGATCTGAAAACAAAGCGAGTAGAAGAAAAGACATGGAAGCAATGAAGAATCAAGGGTGTGAGGTTGAAGCCATAGGCATCAACTATAAGATCTGCACACAGAAAACAGAGCGCCCTTTCAAAATCTTTAGCAAATTTCCAAAACAAATTGACCAAGAAAAAGACCAAGAACCAGAAGAAGAAGGAGCGAAACCTGAACAAGCATGCAGGGGTGGAGTAAGGCATGTCCTCAAATATGTGAGCTTTCGAGCCAAGCCACAAGAAATTCTCGCCATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTAGAGATTCTTGCTGGTAAAGTATCCCCACAAAGTGGATCCATTTTGGTGAACCAGAAACCTGTAGATAATGCTCTGTTCAGGAAGACTTCAGGGTATGTTACACAAAATGATATTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATCAACTCTGCAGCAGAGTCAAGTCACTGATTCAGGAGCTAGGACTCAGCCACGTTGCTAAGACCCGAATTGGAGATAACAGGACCCGTGGAATCTCCGGTGGGGAAAAACGACGAGTTTCAATTGGAGTTGAAGTTATACACGATCCCAAAGTGGTGATTCTGGACGAACCAACTTCTGGGCTTGACAGTACATCTGCTCTGCAGATCATTGAAATGCTAAAGGCCATGGCTGATTCAAGGGGCCGAACTATAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTTAATTCTATATTGTTGTTGGCCAGCGGCTCTGTTTTACACCATGGAACTGCGGATTTGTTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTAGTTGAATTTGCCATTGAGTCCATTGAATCCATTGAAAAACAGCAAAAGTGTCAGCGATTTCAAATTCAAATGCCTACACTATTGCCAGCAACAATGCAGCAAAAGAAAAGTGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAACCATCAACGCTGGAATGGATTTCACCTATGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATCTTTCGTACAAAGGAGCTCTTTGCATGTAGGACGATCCAGATGCTGATTTCGGGATTTGTTTTGGGCTCCATCTTTTGTAACCTCAAGGATGGTCTAGAGGGTGCTGAAGAAAGGGTAGGTCTATTTGCCTTCATATTATCGTTCTTACTATCGAGCACCATAGAAGCTCTGCCAATTTTCCTACAGGAAAGGGAGATTCTAATGAAGGAGACTTATTGTGGAAGCTACAGAGTATCATCCTATGCAATTGCTAATGGCCTTGTTTACTTGCCATTCCTACTCATCCTTGCCATTTTATTCGCAGTACCCTTATACTGGTTTGTTGGTCTTAACCGGAATTTCACAGCTTTTTTGCACTTCCTGTGGCTGATTTGGTTAGTTCTCTACACGGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTAGTGCCTAATTTTATTGTGGGAAACTCACTCATCGGGGGAGTCATCGGGTCATTCTTCTTGTTCTCTGGTTACTTCATATCAAAACAAGAAATCCCAAAATACTGGATTTTCATGCATTATATATCACTGTTTAAGTATCCCTTTGAAGGGCTTCTGGTTAACGAATTCTCCAACTCAGGTAAGTGCTTACAGTACATGTTTGGGGAGTGTGTGGTGACAGGGGAAGATGTGCTTAAAGAGGAAGGTTATGGGGGCGAAAGGAGTAAATCGAAGAATATTGGGGTCATGGTGTGCTTCATCCTGTTTTACAGGTTGGTTTCCTATATAATTCTTAGATATAGATGCTCGCAAAGGACTTCCTAA 1977 0.4183 MGSENKASRRKDMEAMKNQGCEVEAIGINYKICTQKTERPFKIFSKFPKQIDQEKDQEPEEEGAKPEQACRGGVRHVLKYVSFRAKPQEILAIVGPSGAGKSSLLEILAGKVSPQSGSILVNQKPVDNALFRKTSGYVTQNDILFPLLTVEETLMFSAKLRLKLPQDQLCSRVKSLIQELGLSHVAKTRIGDNRTRGISGGEKRRVSIGVEVIHDPKVVILDEPTSGLDSTSALQIIEMLKAMADSRGRTIILSIHQPGFRIVKLLNSILLLASGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIESIEKQQKCQRFQIQMPTLLPATMQQKKSDVQGESRSGKFTLQQLFQQSKVIDEETINAGMDFTYDFANSRLKETMILSHRFFKNIFRTKELFACRTIQMLISGFVLGSIFCNLKDGLEGAEERVGLFAFILSFLLSSTIEALPIFLQEREILMKETYCGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWFVGLNRNFTAFLHFLWLIWLVLYTANSVVVCFSALVPNFIVGNSLIGGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLVNEFSNSGKCLQYMFGECVVTGEDVLKEEGYGGERSKSKNIGVMVCFILFYRLVSYIILRYRCSQRTS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2192 658 Pfam ABC transporter 78 226 IPR003439 GO:0005524
Acco04g2192 658 Pfam ABC-2 type transporter 386 594 IPR013525 GO:0016020|GO:0140359
Acco04g2192 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 284 IPR027417 -
Acco04g2192 658 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
Acco04g2192 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 14 643 - -
Acco04g2192 658 Gene3D - 68 328 IPR027417 -
Acco04g2192 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 299 IPR003439 GO:0005524
Acco04g2192 658 SMART AAA_5 87 284 IPR003593 GO:0016887
Acco04g2192 658 FunFam ABC transporter G family member 5 62 323 - -
Acco04g2192 658 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2192 Acco-ChrAcco04 37841740 37843716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2192 89 330 Calmodulin-binding Proteins AT2G36910 25.397 7.56e-13 70.1