Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2188 ATGTGTCAGAATATAGGAAATATTATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTATCTTCTCTCCAACAGATGAAGAACTAGTCCTTCACTTTCTTTATCCCAAGTCTTTCCTTCTACCCTGCCATCCCAATATCATCCCTGACCTTGACCTCTCTCTCTTTCACCCTTCCCAACTCAACGGGACGGCGTTGTTAAGTGGAAACCAATACTATTTCTTCACAAAGTATAAGAAAACAAGAGTGACAGAGAGTGGGTATTGGAAGGAAACAGGTGTGACTGAGTCAGTAGTCTCAGCTGATGCAGGCAAGAAAGTTGGGATCAAGAAATATCTGGTGTTCACCAATGGAGAAGCTCCTCATGGTACTGAAACCAGCTGGCTCATGCAAGAGTATCATCTTTGCACTTGTGGGTTTAACACTCGAGGAACCCAAAAATCTGATAAAAGTAGATGGGTACTGTGCCGAGTCTATGAAAACAAGAGAGATTCTGAAGATGATGAAGGTGGGAGTACAGAGCTTTCCTGTATGGATCAAGTGTACATGTCGACGTTGGGTGATGATGAAGAAGAAGTTAGCTTTCCCTAA 591 0.4315 MCQNIGNIMGSERVNLPPGFIFSPTDEELVLHFLYPKSFLLPCHPNIIPDLDLSLFHPSQLNGTALLSGNQYYFFTKYKKTRVTESGYWKETGVTESVVSADAGKKVGIKKYLVFTNGEAPHGTETSWLMQEYHLCTCGFNTRGTQKSDKSRWVLCRVYENKRDSEDDEGGSTELSCMDQVYMSTLGDDEEEVSFP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2188 196 Pfam No apical meristem (NAM) protein 17 135 IPR003441 GO:0003677|GO:0006355
Acco04g2188 196 SUPERFAMILY NAC domain 11 159 IPR036093 GO:0003677|GO:0006355
Acco04g2188 196 Gene3D NAC domain 25 166 IPR036093 GO:0003677|GO:0006355
Acco04g2188 196 ProSiteProfiles NAC domain profile. 16 161 IPR003441 GO:0003677|GO:0006355
Acco04g2188 196 PANTHER NAC TRANSCRIPTION FACTOR 56 16 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2188 Acco-ChrAcco04 37806969 37807821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2188 14 163 NAC Transcription Factor Family AT5G13180 40.764 9.04e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2188 NAM 4e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2188 04 37806969 37807821 Acco04g2188 04 37806969 37807821 ECH