Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2167 ATGCAAGGCAATATTTGCAAGCATGTCATCAAGTTGAACATGATTTGTGAAAATCATCAAGGTTATCAACCATCCATGTCTTTACAGTCTTTTAAAGAGGTTTTGATGGATCTGTGGGCAAAACCAATGGATGATTCAGTTGCCCTGGATCTAGCAGTGGCTTGGACCCATCAAATGCTATATCAAATTCAAAAACTTGTTGAACTAAATAACTCTAGTGGTATTAGCACTGTTGTTAACAATATGCCTTTGAAATGGGTTTCCAGGCGAGTAAGAACCCACTGGCAAACGATCAACAACTTTAGCTCTTACTCCTGACAACGCAGCGAGAGCGTGAGATGGAGAGTGAGACTGAAGGGAGAGTCGGAGGAAGAAGGGAGTACCGAACCCACATACAATTGGATTTCTGAGTTAGAATTAACTGAACCAAAGTCCCATTTCGTTGATTCAATATGTGGTTTCAGGGATGTGGTCGCTATTCAAACTAGAATCAAACAAGAGGCAAGAGAGCATAGATGTACGCGGAATGATATGAATCTCTCCTATCTTAATCGCTTCTCTGAGCGTCTTGTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCAACGGACAGATGATATTGCTATTGAGGGTCGCAACCTGAATTTCTCGTTCCCCACAAGGCATGCGAAAGCTATACCGATTCTTCGGGATTGTTCAATTCACATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAATCCCACTTCAGGAACAATGTACGTGAAAGGGCCCAAAAGTTTTGTTTTCCAAAATCCGGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCTGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGCGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTCTTGTTGGATGAGCTCACAACATTCTTAGACGAAAGTGACCAGGTTGGTGTAATCAAAGCAGTTAGGAACTCTCTGGATACCTCTGCCGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCCTCTACATGGAGGATGGGAAAGTTGTCATGTATGGAGACGCGGAAAGAATAAAAAGTTTCATTGAAGCCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 1320 0.4364 MQGNICKHVIKLNMICENHQGYQPSMSLQSFKEVLMDLWAKPMDDSVALDLAVAWTHQMLYQIQKLVELNNSSGISTVVNNMPLKWVSRRVRTHWQTINNFSSYSXQRSESVRWRVRLKGESEEEGSTEPTYNWISELELTEPKSHFVDSICGFRDVVAIQTRIKQEAREHRCTRNDMNLSYLNRFSERLVAPLYSTTPIRSQRTDDIAIEGRNLNFSFPTRHAKAIPILRDCSIHIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTMYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTCDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGALYMEDGKVVMYGDAERIKSFIEARQSDYIKQINS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2167 439 ProSitePatterns ABC transporters family signature. 335 349 IPR017871 GO:0005524|GO:0016887
Acco04g2167 439 Gene3D - 205 438 IPR027417 -
Acco04g2167 439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 210 435 IPR003439 GO:0005524
Acco04g2167 439 FunFam ABC transporter I family member 10 206 436 - -
Acco04g2167 439 CDD ABC_cobalt_CbiO_domain1 211 412 IPR015856 GO:0005524|GO:0016020|GO:0055085
Acco04g2167 439 Pfam ABC transporter 230 362 IPR003439 GO:0005524
Acco04g2167 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 425 IPR027417 -
Acco04g2167 439 SMART AAA_5 239 402 IPR003593 GO:0016887
Acco04g2167 439 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 210 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2167 Acco-ChrAcco04 37643055 37651259 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2167 210 438 Calmodulin-binding Proteins AT2G36910 28.800 2.09e-17 83.2