Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2157 ATGGATAAGCTTTATTGGGATGCGTGGTTCTCTGAACTAGAAATGGAAAACCAATATGTTTTTTTAAGAGGAACAAACTCGGGGCAGGATGAAGAAGAAGCTAGAGACATCTTACAGGACCCAACTAATTTATCTTCTGAGAGTGAGGCCATTTTTGCTCCGACCACCGTGGAGGGCGGTGGCGCCACCACCAACTCCATCGTGAACTCTCTGCAATGTCCTTCTCAAACACCACCACTAACTACCTGTGTTTTGTCTTTTGATAAATCAATTGTCATACCAGATATCGTTGATCCTAACAGTTGTTCTTCAAAGCTCAAACGACGCATTGAAGCAGCTAATCGTGACCCACCGCCGATGGACGTTGTCAGAGGAACAAAGAAGACTAGAAGCGGTGCTGATGTGATAGATCACATAATGGCTGAGAGAAGAAGGAGACAGGAACTCACAGAAAGGTTCATAGATCTCTCAGTCACCATCCCTACTGTGTTCGACTGGGTCATTTTGTGTTAA 513 0.4464 MDKLYWDAWFSELEMENQYVFLRGTNSGQDEEEARDILQDPTNLSSESEAIFAPTTVEGGGATTNSIVNSLQCPSQTPPLTTCVLSFDKSIVIPDIVDPNSCSSKLKRRIEAANRDPPPMDVVRGTKKTRSGADVIDHIMAERRRRQELTERFIDLSVTIPTVFDWVILC 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2157 170 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 163 IPR036638 GO:0046983
Acco04g2157 170 PANTHER BHLH TRANSCRIPTION FACTOR 70 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2157 Acco-ChrAcco04 37487147 37487935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2157 122 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 52.273 6.36e-09 52.0