Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2156 ATGAATCTCTCCTATCTTGATCGCTTCTTTGAGCGTCTTGTTGCTCCTATCTACTCTACAACTCCCATCAGGTTCACATTTCTATACAGAACTAAAAATTCATTGGGTTTTGTTGTCTTTTCTCAGTTGGGAAATTCTTCAAACACTTCAACTGATCTTCTTCACTTGGAGCTTTGTTTGCTCATGTTTCATCCTGAATCGGCTGATTTTTTCTTCAGGAGCCAACGGACAGATGATATTGCTATTGAGGGTTGCAACCTGAATTTCTCGTTCCCCACAAGGCATGCGAAAGCTATACCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGTGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAATCCTACTTCAGGAACAATGTACGTGAAAGGGCCCAAAAGTTTTGTTTTCCAAAATCTGGATCATCAGGTGGTAATGCCTACAGTGGAAGCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTGACCTGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTCTTGTTGGATGAGCTCACAATTTTCTTAGACGAAAGTGACCAGGTTGGTGTGATCAAAGCAGTTAGGAACTCTCTGGATACCTCTCCAGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCCTCTACATGGAGGATGGGAAAGTTGTCGTGTATGGAGATGCGGAAAGAATTAGAAGTTTCATTGAAGCCAGGCAATCTGACTATATAAAACAGATAAATTCTTGA 933 0.4287 MNLSYLDRFFERLVAPIYSTTPIRFTFLYRTKNSLGFVVFSQLGNSSNTSTDLLHLELCLLMFHPESADFFFRSQRTDDIAIEGCNLNFSFPTRHAKAIPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTMYVKGPKSFVFQNLDHQVVMPTVEADVAFGLGKFNLTCDEVRSRVSRALHAVGMSDYMQICSNSKWWSEAEVAIAGALAEACKVLLLDELTIFLDESDQVGVIKAVRNSLDTSPGVTALWVTHRLEELNYADGALYMEDGKVVVYGDAERIRSFIEARQSDYIKQINS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2156 310 Pfam ABC transporter 102 233 IPR003439 GO:0005524
Acco04g2156 310 SMART AAA_5 111 273 IPR003593 GO:0016887
Acco04g2156 310 CDD ABC_cobalt_CbiO_domain1 86 283 IPR015856 GO:0005524|GO:0016020|GO:0055085
Acco04g2156 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 296 IPR027417 -
Acco04g2156 310 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 82 294 - -
Acco04g2156 310 Gene3D - 77 309 IPR027417 -
Acco04g2156 310 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 82 306 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2156 Acco-ChrAcco04 37477379 37480003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2156 82 309 Calmodulin-binding Proteins AT2G36910 25.498 2.04e-11 63.2