Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2151 ATGGGTACGACAAAATTGATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCGTCGTATACTTTCTGAAGAGGAAGGTTACGGGTAAAAAAATCCCGCATGTGATCGCAGAAGTAAAAATATTAGAGTACGCTCCATGGGATCTTCCCGCTAAATCTTATTTGACGACTGGAGATTTGGAATGGTACTTTTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGCGCTACGGAAGTTGGGTACTGGAAAACTACTGGGAAGGATAAACCTGTTTATTATGAGGGTCGAGTTGTGGGAAAGAGAAAAACCCTGATATTTCACACAGGTAGAGCTCCTAAAGGTGATAGAACTGATTGGGTTATGCATGAATTTAGGCTCGAAGATCAGGTTCTGGCTGATAGAGGCGTTCCTCAGGATTCCTATTTGCTTTGTAAGATTTTCCAAAAAGATGGTCCTGGTCCTAGGAATGGCGCCCAATATGGAAGGCCTTTCAATGATGAAGACTTTGATGATGAAGAAGAAGAAATTGATGGTGTAGGATCTCTCCCATTAATTGGGGTACATGCTCCAATTACCGTTGATCCTAATACACCTGGCAGTTCTACAGCAATTCATGGTAACCCCCCTGTGAGTACATGCTTTGGTTCACCCCCATCGTCATGTCTTGTGCATCCTTCGGCTCCAACTGATCAAGCTATGTCCAATAATGGGTCTCAGGTTCTAGTTGTTGATGACGTTACTGAATCCCTGGCTCCTTTCACTGAGAATGACACAGTGGCTATGATTGAAAATAACATTGAGAATGATAATTCTGCTGTGGACAATGAAGCTGAAGTTCAACTTTGTTTGGATCCCAATGATATATTCAAGGGCTTGGGAGACCTTGACAATACAAATAAAATCTATCCTGCTGGTAGCTTGCCCTTGGAGTTTTTTGATTATTCGAATTTCTTGGAGCTACGTGACCTGGACAATACAAATCAAAACTATCCTGCTGGTAGCTTGCCCTTGGAGTTTTGTGATGATTCGGATTTCTTGGAGCTACTTGACCTGGACACCACCAGTGGCCCATCAAACTGA 1098 0.4308 MGTTKLIPGFRFHPTDVELVVYFLKRKVTGKKIPHVIAEVKILEYAPWDLPAKSYLTTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGKDKPVYYEGRVVGKRKTLIFHTGRAPKGDRTDWVMHEFRLEDQVLADRGVPQDSYLLCKIFQKDGPGPRNGAQYGRPFNDEDFDDEEEEIDGVGSLPLIGVHAPITVDPNTPGSSTAIHGNPPVSTCFGSPPSSCLVHPSAPTDQAMSNNGSQVLVVDDVTESLAPFTENDTVAMIENNIENDNSAVDNEAEVQLCLDPNDIFKGLGDLDNTNKIYPAGSLPLEFFDYSNFLELRDLDNTNQNYPAGSLPLEFCDDSDFLELLDLDTTSGPSN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2151 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 237 - -
Acco04g2151 365 Gene3D NAC domain 15 157 IPR036093 GO:0003677|GO:0006355
Acco04g2151 365 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Acco04g2151 365 FunFam Nac domain-containing protein 86 15 158 - -
Acco04g2151 365 Pfam No apical meristem (NAM) protein 8 132 IPR003441 GO:0003677|GO:0006355
Acco04g2151 365 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2151 Acco-ChrAcco04 37423805 37426386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2151 1 301 NAC Transcription Factor Family AT5G09330 46.012 1.27e-86 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g2151 NAM 4.4e-33 No_clan