Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2140 ATGATCACTCCTCCCAGAAATCCTCACTCCCCTTCCTTTCTTCCCAAACCTTCTTTTCTTCTCTTCTCCATGGCTTCTCTTCTCTCTCTTTCCCTTCTCTCCTTCTTACTCTTCCTTTCTCTCTCCTCCGCAGCCCGCCACCACCACAAAGCACCACCCACCACCTCCCACCCCCCCTCCACCTCCTCCTCCGTTATCGTCCAGAACGCCTGTAAGGCTACTCGCTTCCCTGAGCAATGCCAATCTTCTCTCACCAAACTCCCTCCCGATCCAACTCCAGTTCAAATCCTCCAATCCGCCTTGTCTGTCTCGTCGGAGAATCTCAAGACGGCGCAATCTATGGTCAAGTCCATCCTCGACTCATCGGCGTCGAGTATTAACCGAACCACCGCTTGCAAGGTCTGCGAGGAGGTGCTCCGTTGCTCCGAATACCGCATCGGTCTGGCGAATGATGCGCTGCCACGTGGCAGGAACAAGGACGCTCGCGCATGGATGAGCGCCGCCCTGCTCTACCAGTACGATTGCTGGTCCGCTTTGAAGTACGCCAACGACACTCGCCAGGTCGGTGAGACGATGGCGTTCTTGGACTCACTCACCAGGATCTCCAGCAACGCGTTGAGCATGATCGCGTCGTACGACATCTCCGGGAAAGACACCGCGTCGTGGAGGCCACCTTTAACGGAGCGCGATGGGTTCTGGGAGGGATCCGGGTCCGGTTCTGGGTCGTTGGCGTTCAGGGGCGGGTTTCCGGCGAAAGTGAAACCGGATGTTACGGTCTGTAAGGATGGTGGGAATGGTTGTTACAAGACGGTGCAGGAGGCTGTTAATGCTGCTCCGGAAAACGCGGGTGACAAGAAATTTGTGATATATATAAAAGAAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTTTATGGGGACGGTATGGGCAAGACCGTCATCACCGGGTCTGCTCAGGCGGATCAACCCGGAATGACAACATACCTTTCAGCTACTGTTGCTATTCTTGGTGATGGATTCATGGCCAAGGCTCTCACAATCCAGAACACAGCAGGCCCTGTAGCTCATCAAGCAGTGGCCTTAAGGTCAGACAGCGATTTCTCTGTGTATGAAGAATGCGAATTCGTAGGCAATCAAGACACACTCTACGCTCACTCCCTTCGCCAATTTTACAAGTCATGCCGCATCCTTGGCAACGTAGACTTCATCTTTGGCAACTCCGCCTCCATCTTCCAAGACTGCCAGATCCTAGTCCGGCCCCGACAAGTGAAGCCAGAGAGCGGCGAGAACAACGCCGTCACTGCACAAGGCAGAACAGACCCTGCTCAGACCACTGGCTTTGTTTTCATAAACTGCTTGATCAATGGGACTAAGGAGTACATGGATTTGTACCATAGCAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCTAGAACAGTGTTCATTAACTCTTTCTTAGAAGAACTGATATCACCCACTGGGTGGTTGCCATGGGGTGGTAATTTTGCACTAAAGACGCTTTACTATGGAGAATATGCCAACACAGGGCCTGGTTCTGATCTGAGTCAGAGAGTTCCATGGAGCAGCAAGGTCCCAGCTGAGCATGTGTCTGCATATTCGGTTCAGAATTTCATCCAAGGAGATGGGTGGATTCCATCATCCCTGATTAGCTCCTTAGATTTGTCATAA 1728 0.522 MITPPRNPHSPSFLPKPSFLLFSMASLLSLSLLSFLLFLSLSSAARHHHKAPPTTSHPPSTSSSVIVQNACKATRFPEQCQSSLTKLPPDPTPVQILQSALSVSSENLKTAQSMVKSILDSSASSINRTTACKVCEEVLRCSEYRIGLANDALPRGRNKDARAWMSAALLYQYDCWSALKYANDTRQVGETMAFLDSLTRISSNALSMIASYDISGKDTASWRPPLTERDGFWEGSGSGSGSLAFRGGFPAKVKPDVTVCKDGGNGCYKTVQEAVNAAPENAGDKKFVIYIKEGVYEETVRVPLEKKNVVFYGDGMGKTVITGSAQADQPGMTTYLSATVAILGDGFMAKALTIQNTAGPVAHQAVALRSDSDFSVYEECEFVGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAQGRTDPAQTTGFVFINCLINGTKEYMDLYHSKPQKHKNYLGRPWKEYSRTVFINSFLEELISPTGWLPWGGNFALKTLYYGEYANTGPGSDLSQRVPWSSKVPAEHVSAYSVQNFIQGDGWIPSSLISSLDLS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2140 575 CDD PMEI-like_3 70 213 - -
Acco04g2140 575 Gene3D - 250 572 IPR012334 -
Acco04g2140 575 SUPERFAMILY Pectin lyase-like 253 569 IPR011050 -
Acco04g2140 575 Pfam Plant invertase/pectin methylesterase inhibitor 67 208 IPR006501 GO:0004857
Acco04g2140 575 PANTHER PECTINESTERASE 38 565 - -
Acco04g2140 575 FunFam Pectinesterase 250 573 - -
Acco04g2140 575 NCBIfam pectinesterase inhibitor domain 30 210 IPR006501 GO:0004857
Acco04g2140 575 FunFam Probable pectinesterase/pectinesterase inhibitor 51 65 211 - -
Acco04g2140 575 Pfam Pectinesterase 256 561 IPR000070 GO:0030599|GO:0042545
Acco04g2140 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 212 IPR035513 -
Acco04g2140 575 SMART PMEI_2 62 208 IPR006501 GO:0004857
Acco04g2140 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 210 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2140 Acco-ChrAcco04 37233868 37236105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2140 59 563 Carbohydrate Esterase AT5G09760 67.319 0.0 720
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2140 04 37233868 37236105 Acco04g2140 04 37233868 37236105 ECH