Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2129 ATGAACCCGCCGGGGAATTCCGCCGCCGGCGGAAAACCACCGTCGTCTCAGAACCAAATTCAACTCCACTGGCCTGGGCAAACTAGTGTTACAGCCATCAATGAATCGTACATTATCAACGAACCATCTCTGCCATTGAATAACGCCGGCGGAAGAAGAGCACCACTTGGAATCGAAGAGACTCACATGCCTCCTCTTGTAGCCAACCAAGAATCTCACATTATCAACGAACAAGTTCAGCCACCGCATCATGCCACCGCCGGAAGAAGAACACCACAGCCGTGTCCCCAGCGTCTTGGAATCGAAGTGCCGCGCCAAACTCGTCTTGTAGTCAACCAAGAATCTCGCATCGTCAATGGACCATTTCTGCCACCACATCGTGCCGGCGACGTAAGAGGAGCAACGCCGTCGTGGCCTCAATGTCTTGGAATCGAAGAGCATCGCCAAACTCCTTTTATAACCAACCAAGAATATCATATTATCAACCAACCATCTCTGCCACCGCATCGTGCCGCCGACGGCAGAAGAACATCTCCGTCGCGGTCCCAGCGTCTTGGAATCGACGAGCCTCACCAAACTCCTCGTTTAGCGGACCAAGGATGTTACATTATCAACCAATCATTTCAGCCACCGCATCACCATGCCGCCGACAGAAGAATAACACAACCGTCGCCTTCTTCCCAGATACGACTTGGAATCCAAGAGCCTGGCCAACTTCCTTCTAGAGTCAACAACGAATCACTCACTATCAGGCAACCATCGCGGCCACTATACTCCGCCGGCCAAAGAACAGGTTTACTGGCCTTAAAAGATCAACTTCTTCTGCTATCAAAAGAAGACAAACTTCTTCAACATCAACAACATGCTCTCAGATTCAACCAAGAATCCCACACCATCAAGAAACCGTCGCCGCCACTATCCTCCACTGGCCAAAGTCCATCTTCACAAGCCTTAAAAGATCAACAGCTTCAGCAATACTTAACAGATCAAATTCTTCTATTTCAAAAATATGCTCCAAGAGTCAACCAAGAATCCCACACTATGAAGAAACCATCGTCGCCGTACGAAGACCGGCGTGGCGGCGCTGTCGATCGTCGCTGTGCCAGTTGCAACAACACTTACGCGACCCAGTGGAGATGTGACCCCACAGGTCAAGAGTCTCTGTGCAATGCCTGTTGGATCAGACTCAACAGGGAGGAGGAGACAAGAGCATTGGGATTACAGTCATCGAACATAGTGTTGCCACCGGGAATGTCATCATCGTCGGCACTAACAAGTTTTTGGCAGGAAGCACGAAGCAGTGTCGAGCTCAAGGAAAATAATGCCAACGCATTTGTGTCGGAAAATAACTTATTGGGACACTCCTCGGGATTACAGTCATCGAATGTAGTGATGCCAACAAGTTTTTTGCAGGAAGAACGAAACAGAGTTACGCTCATGGAAAATACTGACAACCCACTAGTGCTGGAAAATAGCTTCTTGGGACACTCTTCGGGATTACAGTCATCCAACATAGTGATGTCACAACCACCGGAAATGTCACCAACGGCGGCACCAAGTCTTGCAAACAGAGTTCAGCTCATGGAAAATATCTTACTGGGAGATCCACCGGAGGCTCCATTGCCGGACCCATCAGAAGTAGTGTCAAGCCTAACAGATGAAACTCTAGACAACAGCCCCCGAGCCACCAACTCTAGCGCCAGCGGTAACAAAGTTGATCGGTCCCGGAAACGGAGACGTTCATAA 1746 0.496 MNPPGNSAAGGKPPSSQNQIQLHWPGQTSVTAINESYIINEPSLPLNNAGGRRAPLGIEETHMPPLVANQESHIINEQVQPPHHATAGRRTPQPCPQRLGIEVPRQTRLVVNQESRIVNGPFLPPHRAGDVRGATPSWPQCLGIEEHRQTPFITNQEYHIINQPSLPPHRAADGRRTSPSRSQRLGIDEPHQTPRLADQGCYIINQSFQPPHHHAADRRITQPSPSSQIRLGIQEPGQLPSRVNNESLTIRQPSRPLYSAGQRTGLLALKDQLLLLSKEDKLLQHQQHALRFNQESHTIKKPSPPLSSTGQSPSSQALKDQQLQQYLTDQILLFQKYAPRVNQESHTMKKPSSPYEDRRGGAVDRRCASCNNTYATQWRCDPTGQESLCNACWIRLNREEETRALGLQSSNIVLPPGMSSSSALTSFWQEARSSVELKENNANAFVSENNLLGHSSGLQSSNVVMPTSFLQEERNRVTLMENTDNPLVLENSFLGHSSGLQSSNIVMSQPPEMSPTAAPSLANRVQLMENILLGDPPEAPLPDPSEVVSSLTDETLDNSPRATNSSASGNKVDRSRKRRRS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2129 581 CDD ZnF_GATA 366 395 IPR000679 GO:0006355|GO:0043565
Acco04g2129 581 MobiDBLite consensus disorder prediction 1 20 - -
Acco04g2129 581 Gene3D - 363 413 IPR013088 GO:0006355|GO:0008270
Acco04g2129 581 SMART GATA_3 361 412 IPR000679 GO:0006355|GO:0043565
Acco04g2129 581 MobiDBLite consensus disorder prediction 210 244 - -
Acco04g2129 581 ProSiteProfiles GATA-type zinc finger domain profile. 361 413 IPR000679 GO:0006355|GO:0043565
Acco04g2129 581 MobiDBLite consensus disorder prediction 293 319 - -
Acco04g2129 581 MobiDBLite consensus disorder prediction 548 570 - -
Acco04g2129 581 Pfam GATA zinc finger 367 397 IPR000679 GO:0006355|GO:0043565
Acco04g2129 581 MobiDBLite consensus disorder prediction 220 244 - -
Acco04g2129 581 MobiDBLite consensus disorder prediction 533 581 - -
Acco04g2129 581 MobiDBLite consensus disorder prediction 163 194 - -
Acco04g2129 581 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 360 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2129 Acco-ChrAcco04 37131785 37133630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2129 358 424 C2C2-Gata Transcription Factor Family AT2G18380 41.429 1.39e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco04g2129 GATA 9.1e-07 CL0167