Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2117 ATGAGTGAGGCGGGGGCAAGCTCAGGGAAGTGTAATGGGCATGCAAAGCCTCCTGATCCTGATGTTCTTGAAGTTGATCCAACCCGTCGATATGTTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAAGGCATTGGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGATTCAGATTGATGAGGTGCTACAATCACCAGATGACTTGGAAAGGCTCTACTCAGAAGTGAATCTCTTAAAATCATTGAAGAACAATAATATCGTAAAATTCTACAATTCATGGATTGATAATAAGAACAAGACTGTTAACATCATTACTGAGCTGTTCTGCTCGGGTAGCCTCAAACAGTATTGTAAGAAGCATAAGAACTTTAACGTGAAGGCTGTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAGTCATGACCCACCTGTTATACATAGGGATCTGAAATGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAAGGGTCTAATGCTGAGAGTATAATTGGAACCCCTGAGTTTATGGCACCTGAGCTGTACAATGAAAGTTACAATGAATTAGCTGACATATATTCATTTGGAATGTGTATTCTTGAGTTGGTGACTTCTGAGTATCCATATAGTGAATGTAAAACTTCAGCTCAGATATATAAGAAGGTTTCATCGGGTATAAAACCCGCTTCTCTTTCTAAAGTCAAAGATCCAGAAGTGAAATTATTTATCGAGAAATGTCTAGTCCCGGCATCTCAGAGAATGTCGGCAAAGGAGCTTTTGATGGACCCTTTTCTTGAAATTAATAGTTTGGCTAGAAATCGTCGTCTATCATTACCCGATATTGTCATCCCTAAATTTGGAGCCTTTGGAGATCGTATTATTATGTCAGAAGGTCCTGCTACTCAACGATACGGATCAAATTCTTTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCTGGTGATGCTTCACGTTCTCCATATGTTGAGATAAAAAGGTTGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAAAAAGTGATGAGAATTCTGTATCAATGGTTGTTCGGATAGCTTTTCAAGGCGGTCAAGCAAGAAATATTCATTTCTTATTCTACCTGGATAAAGATACTGCTATTTCTGTTTCAAGTGAAATGGTCGAGCATCTCAAACATCTCGAACTTCCGGATCAAAACTTAAAATTTATAGCTGAGTTGATAGACATCATGTTGATTAATTTGGTTCCCGATTGGAAACCTTCTGTAGATATTGCTCATTTAGCTTCAGGAAGTTGTAAGAGAATTATTACTGGACCAAAAGATTTGGAATCAGCAAAACAAAAACAGCCCTCTAAAGATTCCATACAAATTATTACTAGAGAGATATCGCGCTCCATGGCAAGGACAGCCACTTCAGAAAGCCGTTATCACTCTAGCTTAGTTGAATCTTCATCCCATGCCAACAAAGATCATGGAAATACCACTAACATTGATGATTTGTGTAATGAGATTTCAAGTGCTTCTATAACATCTGACATTAACGGGAAGAAGTTATCCTCAGTGTCATTCGTATCTGTGGGGTCAACATTTAATGACTCCAACCTGCCCAGAATACCTGGAGAAACTGAATGCTCTTTTGTATCCACAATGGAAGCGTGGACTGATTATTCTAAGAGTAAGACTTCAGAATTAGGAATTGATGATATGTTGAACTTTCCTAATGTTTCTTCTTCGTCTATCATGGATGATGAGTTGAAAATAGAGTTAGATCTGATTGAACAGAAATACCAAGAGACAATTAAAGAGGCATCGAAGGTAAGATCTCAAGCTATCATGGAGGCCACCAAAAGGAGGTTATCACAGAAGAAGATCCAATCATAA 1971 0.3836 MSEAGASSGKCNGHAKPPDPDVLEVDPTRRYVRYKDVIGKGAFKTCYKALDEVSGLEVAWNQIQIDEVLQSPDDLERLYSEVNLLKSLKNNNIVKFYNSWIDNKNKTVNIITELFCSGSLKQYCKKHKNFNVKAVKGWARQILMGLNYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLATFLEGSNAESIIGTPEFMAPELYNESYNELADIYSFGMCILELVTSEYPYSECKTSAQIYKKVSSGIKPASLSKVKDPEVKLFIEKCLVPASQRMSAKELLMDPFLEINSLARNRRLSLPDIVIPKFGAFGDRIIMSEGPATQRYGSNSLDLDETCELPVITIYDGSGDASRSPYVEIKRLKRGDIFTLKGEKSDENSVSMVVRIAFQGGQARNIHFLFYLDKDTAISVSSEMVEHLKHLELPDQNLKFIAELIDIMLINLVPDWKPSVDIAHLASGSCKRIITGPKDLESAKQKQPSKDSIQIITREISRSMARTATSESRYHSSLVESSSHANKDHGNTTNIDDLCNEISSASITSDINGKKLSSVSFVSVGSTFNDSNLPRIPGETECSFVSTMEAWTDYSKSKTSELGIDDMLNFPNVSSSSIMDDELKIELDLIEQKYQETIKEASKVRSQAIMEATKRRLSQKKIQS 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2117 656 CDD STKc_WNK 30 289 - -
Acco04g2117 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 653 - -
Acco04g2117 656 SUPERFAMILY Protein kinase-like (PK-like) 34 329 IPR011009 -
Acco04g2117 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Acco04g2117 656 FunFam probable serine/threonine-protein kinase WNK9 115 294 - -
Acco04g2117 656 MobiDBLite consensus disorder prediction 1 24 - -
Acco04g2117 656 MobiDBLite consensus disorder prediction 498 525 - -
Acco04g2117 656 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2117 656 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2117 656 Gene3D Phosphorylase Kinase; domain 1 18 113 - -
Acco04g2117 656 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2117 656 Coils Coil 612 639 - -
Acco04g2117 656 FunFam Probable serine/threonine-protein kinase WNK1 17 113 - -
Acco04g2117 656 Gene3D Transferase(Phosphotransferase) domain 1 116 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2117 Acco-ChrAcco04 36986809 36990403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2117 132 457 MAP Kinase Kinase Kinase AT1G49160 65.951 3.39e-157 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco04g2117 Pkinase 2.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2117 04 36986809 36990403 Acco04g2117 04 36986809 36990403 ECH