Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2098 ATGCTAGAGAATTCGAGTTTACCTGAAAGCTCCATTCAACACCGAAGCCACCCAGAGGACGGTGGTGATAAGCCTGTGTCTGATGGACACCACCAACAACAGGAGAAGTTTGAAAACGTGTACAAGTACTGCAGAAAGATTAAAGAATGCCGGTCCAACGGAAAGACTTACCGATTCTTTGAGTTGTTAGAACCTCTTATGAACTCTTCTTACCCTGAAAAGAATAAAGGACAAGCGAGAAACACAGCCAAAACCACAACCACAACCCCAATGGATTTATCCAATGTTATTCGAGGTGCAATTCAACATCCTTACCCCGAAAAGAATGATGAACAAGTGGAAAACATAGCAACAACTACAACCCCAATGGATTTGTCCAATGTTATTCAAGATTCAATTGCACATTCTATACGATTCTCTAGTGAACCCTCCAGTTTAACTACCCATCCGTTGATCCAAGAAGCGGATGAAAATATTCGAAAGAAGAAAAGGAAACTGACGCAGTATTTTGGGGGGTTGATGAGCAAAGTACTAGAGAAGCAAGAGAAGCAGCAGAAGAACTTCATGGAGATCTTTATCAAATGTGAACAAGATAGAATTGCAAGAGAGGAAGCATCGAAGATGGAAGAATTAGCAAGGATTAAGAGGGAGCGAGAACTTTTAGCTCAAGAAAGATCAATTGCTGCAGCGAAAGATGCTGCAGTGCTTGCCCTTCTGAGGAAGTTCACAGGACAAATTGGGACAATAGAATTACCTGACAACCTACCTCCAAATGATTTAGATAAGGACGAGCAAGAAAATCATAATGCAGGAAGTAGTGTTATTGAAAAGCAAGAATGTGGAAATGGTGGGAATTTCACACTGACTAGTCCATCTTCCTGTAGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGATTGAAGACAAACTTTTATGTGGAAAATGAAGTAAATGGGGCTAAAGGGTTTATTCCTATATGGGAGGAGATATCTTCTGCAATGAAAAAACTTGGATACGACCGAAGTGCCAGGAGATGCAAAGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGATGACAAACCAGAAAAAGCCTGAGAGTTCTAAAACATGTCCTTATTTTCACCAGCTGGATGCTCTGTATAATAATAGTGAAAAGCCTAATAATGAGAAGGTGGATGATTCAGCTAGTTCTTTTAAAGATCAACTGAAACCTGAGGAGCTACTAATGCATCTTATGGAGGATCAGTCCCAGGCATCATCAGAGGATGCTGACAGAGAAGGAGGATTAGAATAA 1305 0.4046 MLENSSLPESSIQHRSHPEDGGDKPVSDGHHQQQEKFENVYKYCRKIKECRSNGKTYRFFELLEPLMNSSYPEKNKGQARNTAKTTTTTPMDLSNVIRGAIQHPYPEKNDEQVENIATTTTPMDLSNVIQDSIAHSIRFSSEPSSLTTHPLIQEADENIRKKKRKLTQYFGGLMSKVLEKQEKQQKNFMEIFIKCEQDRIAREEASKMEELARIKRERELLAQERSIAAAKDAAVLALLRKFTGQIGTIELPDNLPPNDLDKDEQENHNAGSSVIEKQECGNGGNFTLTSPSSCRWPKDEVEALIRLKTNFYVENEVNGAKGFIPIWEEISSAMKKLGYDRSARRCKEKWENMNKYFKRMKMTNQKKPESSKTCPYFHQLDALYNNSEKPNNEKVDDSASSFKDQLKPEELLMHLMEDQSQASSEDADREGGLE 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2098 434 Gene3D - 296 359 - -
Acco04g2098 434 CDD GT1 295 361 - -
Acco04g2098 434 ProSiteProfiles Myb-like domain profile. 295 354 IPR001005 -
Acco04g2098 434 MobiDBLite consensus disorder prediction 390 414 - -
Acco04g2098 434 Pfam Myb/SANT-like DNA-binding domain 294 383 IPR044822 -
Acco04g2098 434 MobiDBLite consensus disorder prediction 13 34 - -
Acco04g2098 434 Coils Coil 204 224 - -
Acco04g2098 434 MobiDBLite consensus disorder prediction 387 434 - -
Acco04g2098 434 MobiDBLite consensus disorder prediction 1 34 - -
Acco04g2098 434 PANTHER FI21293P1 32 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2098 Acco-ChrAcco04 36819836 36821662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2098 34 389 Trihelix Transcription Factor Family AT1G76890 40.394 2.35e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco04g2098 Myb_DNA-bind_4 2.3e-20 CL0123