Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2094 ATGGTTAGACGCGTGCTTTCAAAAAATATCTTCATTTTCTCATCCATTTCTTCTTCATTGTCGTCAGTTCGTCCTCTTATCTTTCGAATTTGTCACTTCCCTAGCTCGTTGAGTAGCTCCTCCTTACTTAGACGCCATTATCATGAATCCCGAATTATACCAGTCTCAGTTTGGTGGGATTTTGAGAATTGCCATCCACCTTCTGATGTGAATGTTCTTAGAATTCATCACTTCATAAAGGAGGCAGTTAGAGCCAAAGGGATCATGGGGCCTCTTAAAATTAAGGCATTTGGTGACGTTTATCAGCTCTCAAGGGTCCACCAGGAAGCTCTCGCGTCCACTGGGATCAAAATCATCCATGTTCCTAAAGGTGGAAAGAATAGTGCTGATAAATCTCTTCTTATTGACCTCATGTTTTGGGTTTCCCAAAATCCTCCTCCTGCGCATTTGTTTCTAATTTCAAGTGATAAGGATTTTGCTGAAGTATTGCACCGTTTGAGAATGAATAACTACAACATCCTAATTGCTGGTTTAGAGACTTCTTATCTTCTCTGCAATGTAGCAACTATAGTGTGGCACTGGAATTCATTACGTAGAGGAGAAAATCTTGATGGAAAACATTTCAATCATCCTCCTGATGGTTTGTATGGTTCTTGGTGTGATCATCATGATGCTACTCTTGAAGACGCTTTCTTAGATGGAAAGCAATTTACACGTTCACAAACTCAGGAATTCCCTAAATCTACATCAGGTTTGAACGTGCGCCCAATTCCAAAGGCGGTTGTGCGGCAGCTTCATCAGATATTGAATCTGTATCCAAACGGCATCTCTTTATCACTTCTTCCAACTCTGTTGGAAAGAGCTGGTATCTACATGGATAAAGATTACTATGGATATAAAAGGTTTTCCCTGTTTCTTTCATCAGTGGCATGTGTACATGTTCGGGCTCATCCTGGTAGAGGACTTGTTGCACATTACGTCCCCAAAGAATCTCCAGAACCCATTGAAAGCAGTTTTGTAGCATCCACAGAAGTTGAAAATGAGGAGTTGAATCATGTGGCTACTTCAACAGAATTAAATGGCGATGACAAATATGCTGAGCCAACAAAAAAGGAACCTGTAACTTTCTTGGGTTGGATTAAAAGTTGGTGGCCATTCAGGAAAAAAGTTGGAAACACGCATAATTTGACTGCTCATGAGAATGAGATGGTTAGCAATGCTAAAGAACCTGAGTTGTCAAATCTGAAACGGAGGGTTGGTCATTCTGAAGAGCTCCAGTCATTAAAACAGAGACAAATGGCTAATCAATTTAAGGAGCCTGAGTTATCAGAAGTGGGACAGACGGTGAATCATTATGGAGAGCCGGAGTTATTTTCTTGTAGTTCCTTTTGGAGGGAAGTGGAATCTTTTGTTTTCTCCTCTAAAGGAACACTTCTTGTATTCCACTCAAGAAGCAGGAAGGAAATGACGCTCAGTTTTAAAAAGTATGGATCCCATGTTCTCCACTCTCTTAGTGAAAATGATCTTCTTCTATTGGTGGATTTGCTAATATCTGAGAAAAAATGGTTGGAGGAAAGGCCTTCTCAAACTTTTCCTTTCTGTACCATTCCAAGTAGAACAACACGAAGTAACTTGCAAAAATCATCAGAATTTGAAGTTGATGAAAATCAGAGTGTTCCTCATGCTGGGGTTTCTTCACCTGCCACTCGAAAACGACACACTAAGAAGTCTAGAATTGACATTTTAGCTGATGTTAAGAAACTTGTGCATGAGCTGTTGAGAGAATTCCCAGATGGGTGTAATATGGGTCTGATACCAACTCGCTTTCAGGAGAAGTATGGCTATCCTTTAGATATTGAGAAGCTTGATTATTCCAAGTTATCTCTCCTTATACAGAGCTTGCCCGGAGTAACAACAGAGTATAGTCATTTCTTCCCTGCAAATTATGGCTTACGTGATTCTGGTAAGGAAACTTCAACTCTCAAAATTCAACAGACACAACCAAGTGATGTAGTGTACCGCTATTCAGAGAATGAGTTCTATGATTCACACTCTGAAGACAATCGAAAAGGCTCCCCATGGGAAGAATTAGGACCTGTTTCTGTCAGCAATTCCAACGAGAGTGACCTGGAATCAAAACTAAGCGAGACAACAATAGAGCTGAAGACAGCAATAGATCCTGATTATGAACCTGATTTCTCTGAGGATGATTATTCCGAACTGGGAGGAGGAGATAGCTCCTGTTTAACTCAATCAGAGTATGACCATGTCTTTCCTGCAAATCATGGTACACGTGATTCTGGCAAGGAAACTTCTATTCTCAAACCACGAGAGACAGAACTAAATGATGTAGTGTGCCGCTATTCAGAGGATGAATTTTATGATTCATACTCTGAAGATGATTGGAAAGACTCCCCATGGAAGGAATCAGGGCCTGTTTCTGTCAGGGATCCCGATGAGAGTGACCTGGAGTCAAAACCAGGTCAGGAAGCAATAGAGCTGAAAACTGCAATAGATCCTGATTATGAACCTGGCCTCTCGGACGATGGTTCTTCTGATTCCAGAGGAGATCATTCCTGTTTAACTCAATCAGATGAGGAAGGTGAGCCAAAACTCAATGGGGAAGATAGTTCTTTTCAAAATCTGGACTCAATCTATGGCAGTCAAGAAGGGGAGGATAGTGTGAATCCGAAGAAGGCCAATACAGAAGGCATTGGTCTGGCTGATGGTTTAAATGCACCAAGGATTTCCACCCCTGCTACCAGTTCAGGAATCCATTTAGGGAGCTATAAAGAGAATCATAAGCATAAGAAGAACTCTTCATTTGATGATGAACCAGTATCACACCAGAATAAGGAGCTGATTGAAGGGATATTACGATGCTTGGAAAGGGCAGATGACTTGAGGATGCCAAATTGA 2919 0.4114 MVRRVLSKNIFIFSSISSSLSSVRPLIFRICHFPSSLSSSSLLRRHYHESRIIPVSVWWDFENCHPPSDVNVLRIHHFIKEAVRAKGIMGPLKIKAFGDVYQLSRVHQEALASTGIKIIHVPKGGKNSADKSLLIDLMFWVSQNPPPAHLFLISSDKDFAEVLHRLRMNNYNILIAGLETSYLLCNVATIVWHWNSLRRGENLDGKHFNHPPDGLYGSWCDHHDATLEDAFLDGKQFTRSQTQEFPKSTSGLNVRPIPKAVVRQLHQILNLYPNGISLSLLPTLLERAGIYMDKDYYGYKRFSLFLSSVACVHVRAHPGRGLVAHYVPKESPEPIESSFVASTEVENEELNHVATSTELNGDDKYAEPTKKEPVTFLGWIKSWWPFRKKVGNTHNLTAHENEMVSNAKEPELSNLKRRVGHSEELQSLKQRQMANQFKEPELSEVGQTVNHYGEPELFSCSSFWREVESFVFSSKGTLLVFHSRSRKEMTLSFKKYGSHVLHSLSENDLLLLVDLLISEKKWLEERPSQTFPFCTIPSRTTRSNLQKSSEFEVDENQSVPHAGVSSPATRKRHTKKSRIDILADVKKLVHELLREFPDGCNMGLIPTRFQEKYGYPLDIEKLDYSKLSLLIQSLPGVTTEYSHFFPANYGLRDSGKETSTLKIQQTQPSDVVYRYSENEFYDSHSEDNRKGSPWEELGPVSVSNSNESDLESKLSETTIELKTAIDPDYEPDFSEDDYSELGGGDSSCLTQSEYDHVFPANHGTRDSGKETSILKPRETELNDVVCRYSEDEFYDSYSEDDWKDSPWKESGPVSVRDPDESDLESKPGQEAIELKTAIDPDYEPGLSDDGSSDSRGDHSCLTQSDEEGEPKLNGEDSSFQNLDSIYGSQEGEDSVNPKKANTEGIGLADGLNAPRISTPATSSGIHLGSYKENHKHKKNSSFDDEPVSHQNKELIEGILRCLERADDLRMPN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2094 972 MobiDBLite consensus disorder prediction 813 829 - -
Acco04g2094 972 PANTHER LIMKAIN B LKAP 39 572 IPR024768 GO:0005777|GO:0010468
Acco04g2094 972 MobiDBLite consensus disorder prediction 848 873 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 545 572 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 757 776 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 874 895 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 698 712 - -
Acco04g2094 972 ProSiteProfiles OST-type HTH domain profile. 581 655 IPR025605 -
Acco04g2094 972 Pfam OST-HTH/LOTUS domain 582 642 IPR025605 -
Acco04g2094 972 Pfam OST-HTH/LOTUS domain 260 322 IPR025605 -
Acco04g2094 972 Pfam NYN domain 55 188 IPR021139 GO:0004540
Acco04g2094 972 MobiDBLite consensus disorder prediction 726 747 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 682 713 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 759 776 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 795 949 - -
Acco04g2094 972 Gene3D - 582 643 IPR041966 -
Acco04g2094 972 CDD LOTUS 582 638 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 934 949 - -
Acco04g2094 972 ProSiteProfiles OST-type HTH domain profile. 257 330 IPR025605 -
Acco04g2094 972 Gene3D - 53 196 - -
Acco04g2094 972 MobiDBLite consensus disorder prediction 545 564 - -
Acco04g2094 972 CDD PIN_limkain_b1_N_like 54 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2094 Acco-ChrAcco04 36781046 36784563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2094 55 200 C2H2 Transcription Factor Family AT5G61190 41.497 6.68e-31 129